Evidence map›Paper›PMID 36319964›Full record

ArticleBMC plant biology2022

Plastome phylogenomic analysis reveals evolutionary divergences of Polypodiales suborder Dennstaedtiineae.

Jin-Mei Lu, Xin-Yu Du, Li-Yaung Kuo, Atsushi Ebihara, Leon R Perrie, Zheng-Yu Zuo, Hui Shang, Yi-Han Chang, De-Zhu Li

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Article in BMC plant biology, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

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9 authors.

Jin-Mei Lu *Germplasm Bank of Wild Species, Kunming Institute of Botany, Chinese Academy of Sciences, 132 Lanhei Road, Kunming, 650201, China. lujinmei@mail.kib.ac.cn.
Xin-Yu Du *Germplasm Bank of Wild Species, Kunming Institute of Botany, Chinese Academy of Sciences, 132 Lanhei Road, Kunming, 650201, China.
Li-Yaung KuoInstitute of Molecular and Cellular Biology, National Tsing Hua University, Hsinchu, 30013, Taiwan.
Atsushi EbiharaDepartment of Botany, National Museum of Nature and Science, 4-1-1 Amakubo, Tsukuba, Ibaraki, 305-0005, Japan.
Leon R PerrieMuseum of New Zealand Te Papa Tongarewa, Cable Street, Wellington, 6011, New Zealand.
Zheng-Yu ZuoGermplasm Bank of Wild Species, Kunming Institute of Botany, Chinese Academy of Sciences, 132 Lanhei Road, Kunming, 650201, China.
Hui ShangShanghai Chenshan Plant Science Research Center, Chinese Academy of Sciences, Shanghai Chenshan Botanical Garden, Shanghai, 201602, China.
Yi-Han ChangTaiwan Forestry Research Institute, Taipei, 10066, Taiwan.
De-Zhu LiGermplasm Bank of Wild Species, Kunming Institute of Botany, Chinese Academy of Sciences, 132 Lanhei Road, Kunming, 650201, China. dzl@mail.kib.ac.cn.

Funding

the Chinese Academy of Sciences 2017-LSF-GBOWS-02the National Natural Science Foundation of China 31970232
6 · The paper itself

Abstract

backgroundPolypodiales suborder Dennstaedtiineae contain a single family Dennstaedtiaceae, eleven genera, and about 270 species, and include some groups that were previously placed in Dennstaedtiaceae, Hypolepidaceae, Monachosoraceae, and Pteridaceae. The classification and phylogenetic relationships among these eleven genera have been poorly understood. To explore the deep relationships within suborder Dennstaedtiineae and estimate the early diversification of this morphologically heterogeneous group, we analyzed complete plastomes of 57 samples representing all eleven genera of suborder Dennstaedtiineae using maximum likelihood and Bayesian inference.

resultsThe phylogenetic relationships of all the lineages in the bracken fern family Dennstaedtiaceae were well resolved with strong support values. All six genera of Hypolepidoideae were recovered as forming a monophyletic group with full support, and Pteridium was fully supported as sister to all the other genera in Hypolepidoideae. Dennstaedtioideae (Dennstaedtia s.l.) fell into four clades with full support: the Microlepia clade, the northern Dennstaedtia clade, the Dennstaedtia globulifera clade, and the Dennstaedtia s.s. clade. Monachosorum was strongly resolved as sister to all the remaining genera of suborder Dennstaedtiineae. Based on the well resolved relationships among genera, the divergence between Monachosorum and other groups of suborder Dennstaedtiineae was estimated to have occurred in the Early Cretaceous, and all extant genera (and clades) in Dennstaedtiineae, were inferred to have diversified since the Late Oligocene.

conclusionThis study supports reinstating a previously published family Monachosoraceae as a segregate from Dennstaedtiaceae, based on unique morphological evidence, the shady habitat, and the deep evolutionary divergence from its closest relatives.

Indexed as

PhylogenyBayes TheoremFernsSpecies SpecificityDennstaedtiaceaeDivergence timeMonachosoraceaeMonachosorumMonophylyMorphological characterPlastid phylogenomics

Identifiers

PMID36319964
PMCPMC9628275

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