Evidence map›Paper›PMID 36317887›Full record

ArticlemSystems2022

Transcriptomic-Guided Phosphonate Utilization Analysis Unveils Evidence of Clathrin-Mediated Endocytosis and Phospholipid Synthesis in the Model Diatom,

Huilin Shu, Yanchun You, Hongwei Wang, Jingtian Wang, Ling Li, Jian Ma, Xin Lin

Erratum issuedOpen access · goldAbstract read
In one paragraph

Article in mSystems, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
1.0field-weighted citation impact, top 27% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 13 citations in OpenAlex.

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4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

7 authors at 1 institution in 1 country.

Huilin ShuState Key Laboratory of Marine Environmental Science, Xiamen University, Xiamen, China.
Yanchun YouState Key Laboratory of Marine Environmental Science, Xiamen University, Xiamen, China.
Hongwei WangState Key Laboratory of Marine Environmental Science, Xiamen University, Xiamen, China.
Jingtian WangState Key Laboratory of Marine Environmental Science, Xiamen University, Xiamen, China.
Ling LiState Key Laboratory of Marine Environmental Science, Xiamen University, Xiamen, China.
Jian MaState Key Laboratory of Marine Environmental Science, Xiamen University, Xiamen, China.
Xin LinState Key Laboratory of Marine Environmental Science, Xiamen University, Xiamen, China.
Xiamen University · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Phosphonates are important components of marine organic phosphorus, but their bioavailability and catabolism by eukaryotic phytoplankton remain enigmatic. Here, diatom Phaeodactylum tricornutum was used to investigate the bioavailability of phosphonates and describe the underlying molecular mechanism. The results showed that 2-aminoethylphosphonic acid (2-AEP) can be utilized as an alternative phosphorus source. Comparative transcriptomics revealed that the utilization of 2-AEP comprised 2 steps, including molecular uptake through clathrin-mediated endocytosis and incorporation into the membrane phospholipids in the form of diacylglyceryl-2-AEP (DAG-2-AEP). In the global ocean, we found the prevalence and dynamic expression pattern of key genes that are responsible for vesicle formation (

Indexed as

DiatomsOrganophosphonatesAminoethylphosphonic AcidClathrinEndocytosisPhosphorusPhytoplanktonTranscriptomeAminoethylphosphonic AcidClathrinOrganophosphonatesPhosphorusdiatomendocytosisPhaeodactylum tricornutumphospholipidphosphonate utilizationtranscriptome

Identifiers

PMID36317887
PMCPMC9765203
OpenAlexW4307838423

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.