Evidence map›Paper›PMID 36317462›Full record

ArticleBrain : a journal of neurology2023

The top 10 most frequently involved genes in hereditary optic neuropathies in 2186 probands.

Aude Rocatcher, Valérie Desquiret-Dumas, Majida Charif, Marc Ferré, Philippe Gohier, Delphine Mirebeau-Prunier, Christophe Verny, Dan Milea, Guy Lenaers, HON Collaborators Group and 3 more

Abstract read
PubMed Publisher
In one paragraph

Article in Brain : a journal of neurology, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 29 papers.

0numbers the graph read from it
0cells of the map it votes in
29citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

29 citing papers in PubMed.

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  12. RTN4IP1 Contributes to ESCC via Regulation of Amino Acid Transporters.Advanced science (Weinheim, Baden-Wurttemberg, Germany) · 2025
    Article
  13. Article
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  17. Primary mitochondrial disorders and mimics: Insights from a large French cohort.Annals of clinical and translational neurology · 2024
    Article
  18. Article
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4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

13 authors.

Aude RocatcherDépartement d'Ophtalmologie, Centre Hospitalier Universitaire d'Angers, 49933 Angers, France.
Valérie Desquiret-DumasUniversité d'Angers, Centre National de la Recherche Scientifique (CNRS 6015), Institut National de la Santé et de la Recherche Médicale (INSERM U1083), Unité Mixte de Recherche (UMR) MITOVASC, 49000 Angers, France.
Majida CharifUniversité d'Angers, Centre National de la Recherche Scientifique (CNRS 6015), Institut National de la Santé et de la Recherche Médicale (INSERM U1083), Unité Mixte de Recherche (UMR) MITOVASC, 49000 Angers, France.
Marc FerréUniversité d'Angers, Centre National de la Recherche Scientifique (CNRS 6015), Institut National de la Santé et de la Recherche Médicale (INSERM U1083), Unité Mixte de Recherche (UMR) MITOVASC, 49000 Angers, France.ORCID 0000-0001-8265-7249
Philippe GohierDépartement d'Ophtalmologie, Centre Hospitalier Universitaire d'Angers, 49933 Angers, France.
Delphine Mirebeau-PrunierUniversité d'Angers, Centre National de la Recherche Scientifique (CNRS 6015), Institut National de la Santé et de la Recherche Médicale (INSERM U1083), Unité Mixte de Recherche (UMR) MITOVASC, 49000 Angers, France.
Christophe VernyUniversité d'Angers, Centre National de la Recherche Scientifique (CNRS 6015), Institut National de la Santé et de la Recherche Médicale (INSERM U1083), Unité Mixte de Recherche (UMR) MITOVASC, 49000 Angers, France.
Dan MileaDépartement d'Ophtalmologie, Centre Hospitalier Universitaire d'Angers, 49933 Angers, France.
Guy LenaersUniversité d'Angers, Centre National de la Recherche Scientifique (CNRS 6015), Institut National de la Santé et de la Recherche Médicale (INSERM U1083), Unité Mixte de Recherche (UMR) MITOVASC, 49000 Angers, France.
HON Collaborators Group
Dominique BonneauUniversité d'Angers, Centre National de la Recherche Scientifique (CNRS 6015), Institut National de la Santé et de la Recherche Médicale (INSERM U1083), Unité Mixte de Recherche (UMR) MITOVASC, 49000 Angers, France.
Pascal ReynierUniversité d'Angers, Centre National de la Recherche Scientifique (CNRS 6015), Institut National de la Santé et de la Recherche Médicale (INSERM U1083), Unité Mixte de Recherche (UMR) MITOVASC, 49000 Angers, France.ORCID 0000-0003-0802-4608
Patrizia Amati-BonneauUniversité d'Angers, Centre National de la Recherche Scientifique (CNRS 6015), Institut National de la Santé et de la Recherche Médicale (INSERM U1083), Unité Mixte de Recherche (UMR) MITOVASC, 49000 Angers, France.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Hereditary optic neuropathies are caused by the degeneration of retinal ganglion cells whose axons form the optic nerves, with a consistent genetic heterogeneity. As part of our diagnostic activity, we retrospectively evaluated the combination of Leber hereditary optic neuropathy mutations testing with the exon sequencing of 87 nuclear genes on 2186 patients referred for suspected hereditary optic neuropathies. The positive diagnosis rate in individuals referred for Leber hereditary optic neuropathy testing was 18% (199/1126 index cases), with 92% (184/199) carrying one of the three main pathogenic variants of mitochondrial DNA (m.11778G>A, 66.5%; m.3460G>A, 15% and m.14484T>C, 11%). The positive diagnosis rate in individuals referred for autosomal dominant or recessive optic neuropathies was 27% (451/1680 index cases), with 10 genes accounting together for 96% of this cohort. This represents an overall positive diagnostic rate of 30%. The identified top 10 nuclear genes included OPA1, WFS1, ACO2, SPG7, MFN2, AFG3L2, RTN4IP1, TMEM126A, NR2F1 and FDXR. Eleven additional genes, each accounting for less than 1% of cases, were identified in 17 individuals. Our results show that 10 major genes account for more than 96% of the cases diagnosed with our nuclear gene panel.

Indexed as

Optic Atrophy, Autosomal DominantOptic Atrophy, Hereditary, LeberOptic Nerve DiseasesATPases Associated with Diverse Cellular ActivitiesATP-Dependent ProteasesCarrier ProteinsDNA, MitochondrialHumansMembrane ProteinsMitochondrial ProteinsMutationRetrospective StudiesAFG3L2 protein, humanATPases Associated with Diverse Cellular ActivitiesATP-Dependent ProteasesCarrier ProteinsDNA, MitochondrialMembrane ProteinsMitochondrial ProteinsRTN4IP1 protein, humanTMEM126A protein, humandominant optic atrophyhereditary optic neuropathyLeber hereditary optic neuropathymitochondrial DNArecessive optic atrophy

Identifiers

PMID36317462

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.