Evidence map›Paper›PMID 36316337›Full record

ArticleScientific reports2022

Analysis of rhizosphere bacterial communities of tobacco resistant and non-resistant to bacterial wilt in different regions.

Haoqi Shi, Peiwen Xu, Shengxin Wu, Wen Yu, Yazhi Cheng, Zhihua Chen, Xingyou Yang, Xiangwen Yu, Bingjie Li, Anming Ding and 2 more

Abstract read
In one paragraph

Article in Scientific reports, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

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Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors.

Haoqi ShiKey Laboratory for Tobacco Gene Resources, Tobacco Research Institute of Chinese Academy of Agricultural Sciences, Qingdao, 266101, China.ORCID 0000-0003-3181-2098
Peiwen XuKey Laboratory for Tobacco Gene Resources, Tobacco Research Institute of Chinese Academy of Agricultural Sciences, Qingdao, 266101, China.
Shengxin WuFujian Institute of Tobacco Agricultural Sciences, Fuzhou, 350003, China.
Wen YuFujian Institute of Tobacco Agricultural Sciences, Fuzhou, 350003, China.
Yazhi ChengFujian Institute of Tobacco Agricultural Sciences, Fuzhou, 350003, China.
Zhihua ChenSichuan Tobacco Science Institute, Sichuan Branch of China National Tobacco Corporation, Chengdu, 615000, China.
Xingyou YangSichuan Tobacco Science Institute, Sichuan Branch of China National Tobacco Corporation, Chengdu, 615000, China.
Xiangwen YuSichuan Tobacco Science Institute, Sichuan Branch of China National Tobacco Corporation, Chengdu, 615000, China.
Bingjie LiKey Laboratory for Tobacco Gene Resources, Tobacco Research Institute of Chinese Academy of Agricultural Sciences, Qingdao, 266101, China.
Anming DingKey Laboratory for Tobacco Gene Resources, Tobacco Research Institute of Chinese Academy of Agricultural Sciences, Qingdao, 266101, China. dinganming@caas.cn.
Weifeng WangKey Laboratory for Tobacco Gene Resources, Tobacco Research Institute of Chinese Academy of Agricultural Sciences, Qingdao, 266101, China. wangweifeng@caas.cn.
Yuhe SunKey Laboratory for Tobacco Gene Resources, Tobacco Research Institute of Chinese Academy of Agricultural Sciences, Qingdao, 266101, China.

Funding

Evaluation of Tobacco Bacterial Wilt Resistance Resources and Study on Resistance Mechanism 110202001024(JY-07)Key Science and Technology Projects of Sichuan Tobacco Institute SCYC202002the Central Public-Interest Scientific Institution Basal Research Fund 1610232016017the Central Public-Interest Scientific Institution Basal Research Fund 16102320200002
6 · The paper itself

Abstract

Tobacco bacterial wilt has seriously affected tobacco production. Ethyl methanesulfonate (EMS) induced tobacco bacterial wilt resistant mutants are important for the control of tobacco bacterial wilt. High-throughput sequencing technology was used to study the rhizosphere bacterial community assemblages of bacterial wilt resistant mutant tobacco rhizosphere soil (namely KS), bacterial wilt susceptible tobacco rhizosphere soil (namely GS) and bulk soil (namely BS) in Xuancheng, Huanxi, Yibin and Luzhou. Alpha analysis showed that the bacterial community diversity and richness of KS and GS in the four regions were not significantly different. However, analysis of intergroup variation in the top 15 bacterial communities in terms of abundance showed that the bacterial communities of KS and GS were significantly different from BS, respectively. In addition, pH, alkali-hydrolysable nitrogen (AN) and soil organic carbon (SOC) were positively correlated with the bacterial community of KS and negatively correlated with GS in the other three regions except Huanxi. Network analysis showed that the three soils in the four regions did not show a consistent pattern of network complexity. PICRUSt functional prediction analysis showed that the COG functions were similar in all samples. All colonies were involved in RNA processing and modification, chromatin structure and dynamics, etc. In conclusion, our experiments showed that rhizosphere bacterial communities of tobacco in different regions have different compositional patterns, which are strongly related to soil factors.

Indexed as

NicotianaRhizosphereBacteriaBiodiversityCarbonSoilSoil MicrobiologyCarbonSoil

Identifiers

PMID36316337
PMCPMC9622857

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.