Evidence map›Paper›PMID 36316301›Full record

ArticleJournal of biomedical optics2022

Hyperspectral imaging for tumor segmentation on pigmented skin lesions.

Eleni Aloupogianni, Takaya Ichimura, Mei Hamada, Masahiro Ishikawa, Takuo Murakami, Atsushi Sasaki, Koichiro Nakamura, Naoki Kobayashi, Takashi Obi

Abstract read
In one paragraph

Article in Journal of biomedical optics, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed, 1 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed, 1 synthesis or guideline pooled it.

  1. Pooled it
  2. Article
  3. Article
  4. Article
  5. Article
  6. Article
  7. Article
  8. Article
  9. Review
  10. Hyperspectral imaging-based erythema classification in atopic dermatitis.Skin research and technology : official journal of International Society for Bioengineering and the Skin (ISBS) [and] International Society for Digital Imaging of Skin (ISDIS) [and] International Society for Skin Imaging (ISSI) · 2024
    Article
  11. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors.

Eleni AloupogianniTokyo Institute of Technology, Department of Information and Communications Engineering, Meguro, Japan, Japan.
Takaya IchimuraSaitama Medical University Moroyama Campus, Department of Pathology, Faculty of Medicine, Iruma, Japan, Japan.
Mei HamadaSaitama Medical University Moroyama Campus, Department of Pathology, Faculty of Medicine, Iruma, Japan, Japan.
Masahiro IshikawaSaitama Medical University Hidaka Campus, Faculty of Health and Medical Care, Hidaka, Japan, Japan.
Takuo MurakamiSaitama Medical University Moroyama Campus, Department of Dermatology, Faculty of Medicine, Iruma, Japan, Japan.
Atsushi SasakiSaitama Medical University Moroyama Campus, Department of Pathology, Faculty of Medicine, Iruma, Japan, Japan.
Koichiro NakamuraSaitama Medical University Moroyama Campus, Department of Dermatology, Faculty of Medicine, Iruma, Japan, Japan.
Naoki KobayashiSaitama Medical University Hidaka Campus, Faculty of Health and Medical Care, Hidaka, Japan, Japan.
Takashi ObiTokyo Institute of Technology, Department of Information and Communications Engineering, Meguro, Japan, Japan.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Significance: Malignant skin tumors, which include melanoma and nonmelanoma skin cancers, are the most prevalent type of malignant tumor. Gross pathology of pigmented skin lesions (PSL) remains manual, time-consuming, and heavily dependent on the expertise of the medical personnel. Hyperspectral imaging (HSI) can assist in the detection of tumors and evaluate the status of tumor margins by their spectral signatures. Aim: Tumor segmentation of medical HSI data is a research field. The goal of this study is to propose a framework for HSI-based tumor segmentation of PSL. Approach: An HSI dataset of 28 PSL was prepared. Two frameworks for data preprocessing and tumor segmentation were proposed. Models based on machine learning and deep learning were used at the core of each framework. Results: Cross-validation performance showed that pixel-wise processing achieves higher segmentation performance, in terms of the Jaccard coefficient. Simultaneous use of spatio-spectral features produced more comprehensive tumor masks. A three-dimensional Xception-based network achieved performance similar to state-of-the-art networks while allowing for more detailed detection of the tumor border. Conclusions: Good performance was achieved for melanocytic lesions, but margins were difficult to detect in some cases of basal cell carcinoma. The frameworks proposed in this study could be further improved for robustness against different pathologies and detailed delineation of tissue margins to facilitate computer-assisted diagnosis during gross pathology.

Indexed as

MelanomaSkin NeoplasmsDiagnosis, Computer-AssistedHumansHyperspectral ImagingImage Processing, Computer-AssistedNeural Networks, Computergross pathologyhyperspectralmedical image processingsegmentationskin lesions

Identifiers

PMID36316301
PMCPMC9619132

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.