Evidence map›Paper›PMID 36312035›Full record

ArticleFrontiers in neuroscience2022

CCR7-mediated T follicular helper cell differentiation is associated with the pathogenesis and immune microenvironment of spinal cord injury-induced immune deficiency syndrome.

Chaochen Li, Chunshuai Wu, Guanhua Xu, Yang Liu, Jiajia Chen, Jinlong Zhang, Hongxiang Hong, Chunyan Ji, Zhiming Cui

Abstract read
In one paragraph

Article in Frontiers in neuroscience, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

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Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed.

  1. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors.

Chaochen LiThe First People's Hospital of Nantong, The Second Affiliated Hospital of Nantong University, Nantong University, Nantong, China.
Chunshuai WuThe First People's Hospital of Nantong, The Second Affiliated Hospital of Nantong University, Nantong University, Nantong, China.
Guanhua XuThe First People's Hospital of Nantong, The Second Affiliated Hospital of Nantong University, Nantong University, Nantong, China.
Yang LiuThe First People's Hospital of Nantong, The Second Affiliated Hospital of Nantong University, Nantong University, Nantong, China.
Jiajia ChenThe First People's Hospital of Nantong, The Second Affiliated Hospital of Nantong University, Nantong University, Nantong, China.
Jinlong ZhangThe First People's Hospital of Nantong, The Second Affiliated Hospital of Nantong University, Nantong University, Nantong, China.
Hongxiang HongThe First People's Hospital of Nantong, The Second Affiliated Hospital of Nantong University, Nantong University, Nantong, China.
Chunyan JiThe First People's Hospital of Nantong, The Second Affiliated Hospital of Nantong University, Nantong University, Nantong, China.
Zhiming CuiThe First People's Hospital of Nantong, The Second Affiliated Hospital of Nantong University, Nantong University, Nantong, China.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Spinal cord injury-induced immune deficiency syndrome (SCI-IDS) is a disorder characterized by systemic immunosuppression secondary to SCI that dramatically increases the likelihood of infection and is difficult to treat. T follicular helper (Tfh) cells regulated by chemokine receptor CCR7 are associated with SCI-IDS after acute SCI. The present study explored the roles of CCR7 in SCI-IDS occurrence and immune microenvironment composition. Gene expression profile data of peripheral blood leukocytes from SCI and non-SCI subjects were collected from the Gene Expression Omnibus database. According to differential gene expression analysis, a protein-protein interaction (PPI) network, and risk model construction, the CCR7 expression level was prominently related to acute SCI and CCR7 expression was significantly downregulated after acute SCI. Next, we constructed a clinical prediction model and used it to identify patients with acute SCI. Using Gene Ontology (GO) analysis and gene set enrichment analysis (GSEA), we discovered that immune-related biological processes, such as T cell receptor signaling pathway, were suppressed, whereas chemokine-related signaling pathways were activated after acute SCI. Immune infiltration analysis performed using single sample GSEA and CIBERSORT suggested that Tfh cell function was significantly correlated with the CCR7 expression levels and was considerably reduced after acute SCI. Acute SCI was divided into two subtypes, and we integrated multiple classifiers to analyze and elucidate the immunomodulatory relationships in both subtypes jointly. The results suggested that CCR7 suppresses the immunodeficiency phenotype by activating the chemokine signaling pathway in Tfh cells. In conclusion, CCR7 exhibits potential as a diagnostic marker for acute SCI.

Indexed as

biomarkerCCR7immune microenvironmentmachine learningspinal cord injury-induced immune deficiency syndrome

Identifiers

PMID36312035
PMCPMC9615471

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.