Evidence map›Paper›PMID 36311145›Full record

ArticleFrontiers in plant science2022

Transcriptome analysis of Harumi tangor fruits: Insights into interstock-mediated fruit quality.

Ling Liao, Yunjie Li, Xiaoyi Bi, Bo Xiong, Xun Wang, Honghong Deng, Mingfei Zhang, Guochao Sun, Zhenghua Jin, Zehao Huang and 1 more

Abstract read
In one paragraph

Article in Frontiers in plant science, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

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Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors.

Ling LiaoCollege of Horticulture, Sichuan Agricultural University, Chengdu, China.
Yunjie LiCollege of Horticulture, Sichuan Agricultural University, Chengdu, China.
Xiaoyi BiCollege of Horticulture, Sichuan Agricultural University, Chengdu, China.
Bo XiongCollege of Horticulture, Sichuan Agricultural University, Chengdu, China.
Xun WangInstitute of Pomology and Olericulture, Sichuan Agricultural University, Chengdu, China.
Honghong DengInstitute of Pomology and Olericulture, Sichuan Agricultural University, Chengdu, China.
Mingfei ZhangCollege of Horticulture, Sichuan Agricultural University, Chengdu, China.
Guochao SunInstitute of Pomology and Olericulture, Sichuan Agricultural University, Chengdu, China.
Zhenghua JinCollege of Horticulture, Sichuan Agricultural University, Chengdu, China.
Zehao HuangCollege of Horticulture, Sichuan Agricultural University, Chengdu, China.
Zhihui WangCollege of Horticulture, Sichuan Agricultural University, Chengdu, China.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Harumi tangor fruit with Ponkan as an interstock contains significantly higher levels of total soluble solids compared to Harumi tangor fruit cv.with no interstock. Transcriptome analysis of two graft combinations (Harumi/Hongjv (HP) and cv. cv.Harumi/Ponkan/Hongjv (HPP)) was conducted to identify the genes related to use of the Ponkan interstock. Soluble sugars and organic acids were also measured in the two graft combinations. The results showed that the contents of sucrose, glucose, and fructose were higher in the fruits of HPP than in those of HP; additionally, the titratable acid levels were lower in grafts with interstocks than in grafts without interstocks. Transcriptome analysis of HPP and HP citrus revealed that the interstock regulated auxin and ethylene signals, sugar and energy metabolism, and cell wall metabolism. Trend and Venn analyses suggested that genes related to carbohydrate-, energy-, and hormone-metabolic activities were more abundant in HPP plants than in HP plants during different periods. Moreover, weighted gene co-expression network analysis demonstrated that carbohydrates, hormones, cell wall, and transcription factors may be critical for interstock-mediated citrus fruit development and ripening. The contents of ethylene, auxin, cytokinin, transcription factors, starch, sucrose, glucose, fructose, and total sugar in HPP plants differed considerably than those in HP fruits. Interstocks may help to regulate the early ripening and quality of citrus fruit through the above-mentioned pathways. These findings provide information on the effects of interstock on plant growth and development.

Indexed as

developmentfruit qualitygenetic factorharumi tangorinterstockrootstock

Identifiers

PMID36311145
PMCPMC9608513

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.