Evidence map›Paper›PMID 36310839›Full record

ArticleJournal of the American Statistical Association2022

A Cross-validated Ensemble Approach to Robust Hypothesis Testing of Continuous Nonlinear Interactions: Application to Nutrition-Environment Studies.

Jeremiah Zhe Liu, Wenying Deng, Jane Lee, Pi-I Debby Lin, Linda Valeri, David C Christiani, David C Bellinger, Robert O Wright, Maitreyi M Mazumdar, Brent A Coull

Open access · greenAbstract read
In one paragraph

Article in Journal of the American Statistical Association, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
2.4field-weighted citation impact, top 10% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed, 13 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 4 institutions in 1 country.

Jeremiah Zhe LiuDepartment of Biostatistics, Harvard T.H. Chan School of Public Health, Boston, MA, USA.
Wenying DengDepartment of Biostatistics, Harvard T.H. Chan School of Public Health, Boston, MA, USA.
Jane LeeDepartment of Environmental Health, Harvard T.H. Chan School of Public Health, Boston, MA, USA.
Pi-I Debby LinDepartment of Environmental Health, Harvard T.H. Chan School of Public Health, Boston, MA, USA.
Linda ValeriDepartment of Biostatistics, Columbia Mailman School of Public Health, New York, New York, USA.
David C ChristianiDepartment of Environmental Health, Harvard T.H. Chan School of Public Health, Boston, MA, USA.
David C BellingerDepartment of Environmental Health, Harvard T.H. Chan School of Public Health, Boston, MA, USA.
Robert O WrightDepartment of Environmental Medicine and Public Health, Icahn School of Medicine, New York, NY, USA.
Maitreyi M MazumdarDepartment of Environmental Health, Harvard T.H. Chan School of Public Health, Boston, MA, USA.
Brent A CoullDepartment of Biostatistics, Harvard T.H. Chan School of Public Health, Boston, MA, USA.
Harvard University · USBoston Children's Hospital · USColumbia University · USIcahn School of Medicine at Mount Sinai · US

Funding

Translational Research Support CoreP30ES000002 · NIEHS · HARVARD UNIVERSITY (SCH OF PUBLIC HLTH) · PI JAIME ELIZABETH HART · 1985 to 2026
$44.6M
Stress, Lead, Iron Deficiency and NeurodevelopmentR01ES013744 · NIEHS · ICAHN SCHOOL OF MEDICINE AT MOUNT SINAI · PI Robert O Wright · 2007 to 2026
$13.4M
GRADUATE TRAINING IN BIOSTATISTICST32ES007142 · NIEHS · HARVARD UNIVERSITY (SCH OF PUBLIC HLTH) · PI Brent Andrew Coull · 1985 to 2026
$11.9M
Superfund Metal Mixtures, Biomarkers and NeurodevelopmentP42ES016454 · NIEHS · HARVARD SCHOOL OF PUBLIC HEALTH · PI BELLINGER, DAVID C · 2010 to 2015
$10.1M
Metal Mixtures and NeurodevelopmentR01ES014930 · NIEHS · BRIGHAM AND WOMEN'S HOSPITAL · PI WRIGHT, ROBERT O · 2006 to 2010
$3.2M
Arsenic Exposure and Birth Outcomes in BangladeshR01ES015533 · NIEHS · HARVARD SCHOOL OF PUBLIC HEALTH · PI CHRISTIANI, DAVID C · 2007 to 2011
$2.1M
Methods for Data Integration and Risk Assessment for Environmental MixturesR01ES028811 · NIEHS · ICAHN SCHOOL OF MEDICINE AT MOUNT SINAI · PI COULL, BRENT ANDREW, GENNINGS, CHRIS · 2018 to 2021
$1.9M
Neurodevelopmental Effects of Early Life Arsenic ExposureK23ES017437 · NIEHS · BOSTON CHILDREN'S HOSPITAL · PI MAZUMDAR, MAITREYI · 2009 to 2013
$735k
Vulnerability and Adaptation to Heat and Air Pollution in a Changing ClimateR21ES022585 · NIEHS · HARVARD SCHOOL OF PUBLIC HEALTH · PI DOMINICI, FRANCESCA · 2014 to 2015
$454k
NIEHS NIH HHS K23 ES017437NIEHS NIH HHS P30 ES000002NIEHS NIH HHS P42 ES016454NIEHS NIH HHS R01 ES013744NIEHS NIH HHS R01 ES014930NIEHS NIH HHS R01 ES015533NIEHS NIH HHS R01 ES028811NIEHS NIH HHS R21 ES022585NIEHS NIH HHS T32 ES007142
6 · The paper itself

Abstract

Gene-environment and nutrition-environment studies often involve testing of high-dimensional interactions between two sets of variables, each having potentially complex nonlinear main effects on an outcome. Construction of a valid and powerful hypothesis test for such an interaction is challenging, due to the difficulty in constructing an efficient and unbiased estimator for the complex, nonlinear main effects. In this work we address this problem by proposing a Cross-validated Ensemble of Kernels (CVEK) that learns the space of appropriate functions for the main effects using a cross-validated ensemble approach. With a carefully chosen library of base kernels, CVEK flexibly estimates the form of the main-effect functions from the data, and encourages test power by guarding against over-fitting under the alternative. The method is motivated by a study on the interaction between metal exposures

Indexed as

Cross ValidationEnsemble LearningHypothesis TestingKernel MethodNutrition-environment Interaction

Identifiers

PMID36310839
PMCPMC9611147
OpenAlexW3188031344

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.