Evidence map›Paper›PMID 36310237›Full record

ArticleNature communications2022

Defining cellular complexity in human autosomal dominant polycystic kidney disease by multimodal single cell analysis.

Yoshiharu Muto, Eryn E Dixon, Yasuhiro Yoshimura, Haojia Wu, Kohei Omachi, Nicolas Ledru, Parker C Wilson, Andrew J King, N Eric Olson, Marvin G Gunawan and 8 more

Open access · goldAbstract read
In one paragraph

Article in Nature communications, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 77 papers.

0numbers the graph read from it
0cells of the map it votes in
77citing papers in PubMed
16.8field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

77 citing papers in PubMed, 99 citations in OpenAlex.

  1. Novel Roles of GPCRs in the Renal Collecting Duct.Physiology (Bethesda, Md.) · 2026
    Review
  2. Article
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  9. Combination siRNA delivery as a therapeutic strategy for ADPKD.bioRxiv : the preprint server for biology · 2026
    Article
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17 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

18 authors at 3 institutions in 1 country.

Yoshiharu MutoDivision of Nephrology, Department of Medicine, Washington University in St. Louis, St. Louis, MO, USA.ORCID 0000-0002-0358-9442
Eryn E DixonDivision of Nephrology, Department of Medicine, Washington University in St. Louis, St. Louis, MO, USA.ORCID 0000-0003-4604-7907
Yasuhiro YoshimuraDivision of Nephrology, Department of Medicine, Washington University in St. Louis, St. Louis, MO, USA.
Haojia WuDivision of Nephrology, Department of Medicine, Washington University in St. Louis, St. Louis, MO, USA.ORCID 0000-0002-7866-2544
Kohei OmachiDivision of Nephrology, Department of Medicine, Washington University in St. Louis, St. Louis, MO, USA.
Nicolas LedruDivision of Nephrology, Department of Medicine, Washington University in St. Louis, St. Louis, MO, USA.ORCID 0000-0002-9237-3634
Parker C WilsonDepartment of Pathology and Immunology, Washington University in St. Louis, St. Louis, MO, USA.ORCID 0000-0001-8647-9662
Andrew J KingChinook Therapeutics, Inc., Seattle, WA, USA.
N Eric OlsonChinook Therapeutics, Inc., Seattle, WA, USA.
Marvin G GunawanChinook Therapeutics, Inc., Vancouver, BC, Canada.ORCID 0000-0001-7037-417X
Jay J KuoChinook Therapeutics, Inc., Vancouver, BC, Canada.ORCID 0000-0001-8741-2638
Jennifer H CoxChinook Therapeutics, Inc., Vancouver, BC, Canada.
Jeffrey H MinerDivision of Nephrology, Department of Medicine, Washington University in St. Louis, St. Louis, MO, USA.ORCID 0000-0002-1510-8714
Stephen L SeligerDepartment of Medicine, University of Maryland School of Medicine, Baltimore, MD, USA.
Owen M WoodwardDepartment of Physiology, University of Maryland School of Medicine, Baltimore, MD, USA.ORCID 0000-0001-9514-2180
Paul A WellingJohns Hopkins School of Medicine, Baltimore, MD, USA.
Terry J WatnickDepartment of Medicine, University of Maryland School of Medicine, Baltimore, MD, USA.
Benjamin D HumphreysDivision of Nephrology, Department of Medicine, Washington University in St. Louis, St. Louis, MO, USA. humphreysbd@wustl.edu.ORCID 0000-0002-6420-8703
Washington University in St. Louis · USUniversity of Maryland, Baltimore · USJohns Hopkins University · US

Funding

Research BaseP30DK090868 · NIDDK · UNIVERSITY OF MARYLAND BALTIMORE · PI WATNICK, TERRY J · 2010 to 2019
$11.1M
The Single Cell Landscape of Early Human Diabetic NephropathyK08DK126847 · NIDDK · WASHINGTON UNIVERSITY · PI Parker C. Wilson · 2022 to 2026
$840k
NIDDK NIH HHS K08 DK126847NIDDK NIH HHS P30 DK090868
6 · The paper itself

Abstract

Autosomal dominant polycystic kidney disease (ADPKD) is the leading genetic cause of end stage renal disease characterized by progressive expansion of kidney cysts. To better understand the cell types and states driving ADPKD progression, we analyze eight ADPKD and five healthy human kidney samples, generating single cell multiomic atlas consisting of ~100,000 single nucleus transcriptomes and ~50,000 single nucleus epigenomes. Activation of proinflammatory, profibrotic signaling pathways are driven by proximal tubular cells with a failed repair transcriptomic signature, proinflammatory fibroblasts and collecting duct cells. We identify GPRC5A as a marker for cyst-lining collecting duct cells that exhibits increased transcription factor binding motif availability for NF-κB, TEAD, CREB and retinoic acid receptors. We identify and validate a distal enhancer regulating GPRC5A expression containing these motifs. This single cell multiomic analysis of human ADPKD reveals previously unrecognized cellular heterogeneity and provides a foundation to develop better diagnostic and therapeutic approaches.

Indexed as

CystsPolycystic Kidney, Autosomal DominantEpithelial CellsHumansKidneyKidney TubulesReceptors, G-Protein-CoupledSingle-Cell AnalysisGPRC5A protein, humanReceptors, G-Protein-Coupled

Identifiers

PMID36310237
PMCPMC9618568
OpenAlexW4307610246

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.