Evidence map›Paper›PMID 36310218›Full record

ArticleMethods in molecular biology (Clifton, N.J.)2023

Spectrally Resolved FRET Microscopy of α-Synuclein Phase-Separated Liquid Droplets.

Jaladhar Mahato, Soumik Ray, Samir K Maji, Arindam Chowdhury

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Article in Methods in molecular biology (Clifton, N.J.), 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
1.0field-weighted citation impact, top 24% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed, 2 citations in OpenAlex.

  1. Biomolecular condensates and disease pathogenesis.Science China. Life sciences · 2024
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 1 institution in 1 country.

Jaladhar MahatoDepartment of Chemistry, IIT Bombay, Mumbai, India.
Soumik RayDepartment of Biosciences and Bioengineering, IIT Bombay, Mumbai, India.
Samir K MajiDepartment of Biosciences and Bioengineering, IIT Bombay, Mumbai, India. samirmaji@iitb.ac.in.
Arindam ChowdhuryDepartment of Chemistry, IIT Bombay, Mumbai, India. arindam@chem.iitb.ac.in.
Indian Institute of Technology Bombay · IN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Liquid-liquid phase separation (LLPS) has emerged as an important phenomenon associated with formation of membraneless organelles. Recently, LLPS has been shown to act as nucleation centers for disease-associated protein aggregation and amyloid fibril formation. Phase-separated α-synuclein droplets gradually rigidify during the course of protein aggregation, and it is very challenging to understand the biomolecular interactions that lead to liquid-like to solid-like transition using conventional ensemble measurements. Here, we describe a spectrally-resolved fluorescence microscopy based Förster resonance energy transfer (FRET) imaging to probe interactions of α-synuclein in individual droplets during LLPS-mediated aggregation. By acquiring entire emission spectral profiles of individual droplets upon sequential excitation of acceptors and donors therein, this technique allows for the quantification of sensitized emission proportional to the extent of FRET, which enables interrogation of the evolution of local interactions of donor-/acceptor-labeled α-synuclein molecules within each droplet. The present study on single droplets is not only an important development for studying LLPS but can also be used to investigate self-assembly or aggregation in biomolecular systems and soft materials.

Indexed as

alpha-SynucleinFluorescence Resonance Energy TransferMicroscopy, FluorescenceProtein Aggregatesalpha-SynucleinProtein AggregatesBiomolecular interactionsDomain interactionLiquid droplet agingLiquid-liquid phase separationSensitization imagingSpectrally-resolved FRET microscopyα-synuclein

Identifiers

PMID36310218
OpenAlexW4307643250

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.