Evidence map›Paper›PMID 36309883›Full record

ArticleMolecular and cellular biochemistry2023

Comprehensive analysis of transcriptomics and metabolomics to understand chronic ethanol induced murine cardiotoxicity.

Qiupeng Xue, Xiaochen Liu, Rongzhe Zhu, Tianyi Zhang, Xiaoru Dong, Yan Jiang

Abstract read
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In one paragraph

Article in Molecular and cellular biochemistry, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
0.6field-weighted citation impact, top 33% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 4 citations in OpenAlex.

  1. Article
  2. Article
  3. Metabolites Profiling and Bioassays RevealAntioxidants (Basel, Switzerland) · 2023
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 1 institution in 1 country.

Qiupeng XueDepartment of Forensic Medicine, School of Basic Medical Sciences, Fudan University, Shanghai, 200032, China.
Xiaochen LiuDepartment of Forensic Medicine, School of Basic Medical Sciences, Fudan University, Shanghai, 200032, China.
Rongzhe ZhuDepartment of Forensic Medicine, School of Basic Medical Sciences, Fudan University, Shanghai, 200032, China.
Tianyi ZhangDepartment of Forensic Medicine, School of Basic Medical Sciences, Fudan University, Shanghai, 200032, China.
Xiaoru DongDepartment of Forensic Medicine, School of Basic Medical Sciences, Fudan University, Shanghai, 200032, China.
Yan JiangDepartment of Forensic Medicine, School of Basic Medical Sciences, Fudan University, Shanghai, 200032, China. jiangyan@fudan.edu.cn.
Shanghai Medical College of Fudan University · CN

Funding

National Natural Science Foundation of China Grant Nos. 8187152
6 · The paper itself

Abstract

Alcohol abuse has attracted public attention and long-term alcohol exposure can lead to alcohol-featured non-ischemic dilated cardiomyopathy. However, the precise underlying mechanisms of alcoholic cardiomyopathy remain to be elucidated. This study aimed to comprehensively characterize alcohol abuse-mediated effects on downstream metabolites and genes transcription using a multi-omics strategy. We established chronic ethanol intoxication model in adult male C57BL/6 mice through 8 weeks of 95% alcohol vapor administration and performed metabolomics analysis, mRNA-seq and microRNA-seq analysis with myocardial tissues. Firstly, ethanol markedly induced ejection fraction reductions, cardiomyocyte hypertrophy, and myocardial fibrosis in mice with myocardial oxidative injury. In addition, the omics analysis identified a total of 166 differentially expressed metabolites (DEMs), 241 differentially expressed genes (DEGs) and 19 differentially expressed microRNAs (DEmiRNAs), respectively. The results highlighted that alcohol abuse mainly interfered with endogenous lipids, amino acids and nucleotides production and the relevant genes transcription in mice hearts. Based on KEGG database, the affected signaling pathways are primarily mapped to the antigen processing and presentation, regulation of actin cytoskeleton, AMPK signaling pathway, tyrosine metabolism and PPAR signaling pathway, etc. Furthermore, 9 hub genes related to oxidative stress from DEGs were selected based on function annotation, and potential alcoholic cardiotoxic oxidative stress biomarkers were determined through establishing PPI network and DEmiRNAs-DEGs cross-talk. Altogether, our data strongly supported the conclusion that ethanol abuse characteristically affected amino acid and energy metabolism, nucleotide metabolism and especially lipids metabolism in mice hearts, and underlined the values of lipids signaling and oxidative stress in the treatment strategies.

Indexed as

AlcoholismEthanolAnimalsCardiotoxicityLipidsMaleMiceMice, Inbred C57BLTranscriptomeEthanolLipidsAlcoholic cardiomyopathyIntegrative analysisMetabolomicsOxidative stressTranscriptomics

Identifiers

PMID36309883
OpenAlexW4307656892

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.