Evidence map›Paper›PMID 36309574›Full record

ArticleScientific reports2022

Gene family expansions in Antarctic winged midge as a strategy for adaptation to cold environments.

Heesoo Kim, Han-Woo Kim, Jun Hyuck Lee, Joonho Park, Hyoungseok Lee, Sanghee Kim, Seung Chul Shin

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
6.2field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed, 24 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 4 institutions in 1 country.

Heesoo KimDivision of Life Sciences, Korea Polar Research Institute (KOPRI), Incheon, 21990, Republic of Korea.
Han-Woo KimResearch Unit of Cryogenic Novel Material, Korea Polar Research Institute, Incheon, 21990, Republic of Korea.
Jun Hyuck LeeResearch Unit of Cryogenic Novel Material, Korea Polar Research Institute, Incheon, 21990, Republic of Korea.
Joonho ParkDepartment of Fine Chemistry, Seoul National University of Science and Technology, Seoul, Republic of Korea.
Hyoungseok LeeDivision of Life Sciences, Korea Polar Research Institute (KOPRI), Incheon, 21990, Republic of Korea.
Sanghee KimDivision of Life Sciences, Korea Polar Research Institute (KOPRI), Incheon, 21990, Republic of Korea. sangheekim@kopri.re.kr.
Seung Chul ShinDivision of Life Sciences, Korea Polar Research Institute (KOPRI), Incheon, 21990, Republic of Korea. biotech21@gmail.com.
Korea Polar Research Institute · KRKorea University of Science and Technology · KRNational Institute of Biological Resources · KRSeoul National University of Science and Technology · KR

Funding

Korea Polar Research Institute PE22130 and 22140
6 · The paper itself

Abstract

Parochlus steinenii is the only flying insect native to Antarctica. To elucidate the molecular mechanisms underlying its adaptation to cold environments, we conducted comparative genomic analyses of P. steinenii and closely related lineages. In an analysis of gene family evolution, 68 rapidly evolving gene families, involved in the innate immune system, unfolded protein response, DNA packaging, protein folding, and unsaturated fatty acid biosynthesis were detected. Some gene families were P. steinenii-specific and showed phylogenetic instability. Acyl-CoA delta desaturase and heat shock cognate protein 70 (Hsc70) were representative gene families, showing signatures of positive selection with multiple gene duplication events. Acyl-CoA delta desaturases may play pivotal roles in membrane fluidity, and expanded Hsc70 genes may function as chaperones or thermal sensors in cold environments. These findings suggest that multiple gene family expansions contributed to the adaptation of P. steinenii to cold environments.

Indexed as

ChironomidaeAdaptation, PhysiologicalAnimalsAntarctic RegionsCoenzyme ACold TemperatureFatty Acid DesaturasesPhylogenyStearoyl-CoA DesaturaseCoenzyme AFatty Acid DesaturasesStearoyl-CoA Desaturase

Identifiers

PMID36309574
PMCPMC9617917
OpenAlexW4307848423

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.