Evidence map›Paper›PMID 36307551›Full record

ArticleEuropean radiology2023

Fully-automated deep learning-based flow quantification of 2D CINE phase contrast MRI.

Maurice Pradella, Michael B Scott, Muhammad Omer, Seth K Hill, Lisette Lockhart, Xin Yi, Alborz Amir-Khalili, Alireza Sojoudi, Bradley D Allen, Ryan Avery and 1 more

Open access · hybridAbstract read
In one paragraph

Article in European radiology, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
1.2field-weighted citation impact, top 23% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 10 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 2 institutions in 3 countries.

Maurice PradellaDepartment of Radiology, Northwestern University, 737 N Michigan Ave, Suite 1600, Chicago, IL, 60611, USA. maurice.pradella@northwestern.edu.ORCID http://orcid.org/0000-0003-2449-7835
Michael B ScottDepartment of Radiology, Northwestern University, 737 N Michigan Ave, Suite 1600, Chicago, IL, 60611, USA.
Muhammad OmerCircle Cardiovascular Imaging Inc., 800 5th Avenue SW, Suite 1100, Calgary, AB, Canada.
Seth K HillDepartment of Radiology, Northwestern University, 737 N Michigan Ave, Suite 1600, Chicago, IL, 60611, USA.
Lisette LockhartCircle Cardiovascular Imaging Inc., 800 5th Avenue SW, Suite 1100, Calgary, AB, Canada.
Xin YiCircle Cardiovascular Imaging Inc., 800 5th Avenue SW, Suite 1100, Calgary, AB, Canada.
Alborz Amir-KhaliliCircle Cardiovascular Imaging Inc., 800 5th Avenue SW, Suite 1100, Calgary, AB, Canada.
Alireza SojoudiCircle Cardiovascular Imaging Inc., 800 5th Avenue SW, Suite 1100, Calgary, AB, Canada.
Bradley D AllenDepartment of Radiology, Northwestern University, 737 N Michigan Ave, Suite 1600, Chicago, IL, 60611, USA.
Ryan AveryDepartment of Radiology, Northwestern University, 737 N Michigan Ave, Suite 1600, Chicago, IL, 60611, USA.
Michael MarklDepartment of Radiology, Northwestern University, 737 N Michigan Ave, Suite 1600, Chicago, IL, 60611, USA.
Northwestern University · USCircle Cardiovascular Imaging · CA

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

objectivesTime-resolved, 2D-phase-contrast MRI (2D-CINE-PC-MRI) enables in vivo blood flow analysis. However, accurate vessel contour delineation (VCD) is required to achieve reliable results. We sought to evaluate manual analysis (MA) compared to the performance of a deep learning (DL) application for fully-automated VCD and flow quantification and corrected semi-automated analysis (corSAA).

methodsWe included 97 consecutive patients (age = 52.9 ± 16 years, 41 female) with 2D-CINE-PC-MRI imaging on 1.5T MRI systems at sinotubular junction (STJ), and 28/97 also received 2D-CINE-PC at main pulmonary artery (PA). A cardiovascular radiologist performed MA (reference) and corSAA (built-in tool) in commercial software for all cardiac time frames (median: 20, total contours per analysis: 2358 STJ, 680 PA). DL-analysis automatically performed VCD, followed by net flow (NF) and peak velocity (PV) quantification. Contours were compared using Dice similarity coefficients (DSC). Discrepant cases (> ± 10 mL or > ± 10 cm/s) were reviewed in detail.

resultsDL was successfully applied to 97% (121/125) of the 2D-CINE-PC-MRI series (STJ: 95/97, 98%, PA: 26/28, 93%). Compared to MA, mean DSC were 0.91 ± 0.02 (DL), 0.94 ± 0.02 (corSAA) at STJ, and 0.85 ± 0.08 (DL), 0.93 ± 0.02 (corSAA) at PA; this indicated good to excellent DL-performance. Flow quantification revealed similar NF at STJ (p = 0.48) and PA (p > 0.05) between methods while PV assessment was significantly different (STJ: p < 0.001, PA: p = 0.04). A detailed review showed noisy voxels in MA and corSAA impacted PV results. Overall, DL analysis compared to human assessments was accurate in 113/121 (93.4%) cases.

conclusionsFully-automated DL-analysis of 2D-CINE-PC-MRI provided flow quantification at STJ and PA at expert level in > 93% of cases with results being available instantaneously. KEY POINTS: • Deep learning performed flow quantification on clinical 2D-CINE-PC series at the sinotubular junction and pulmonary artery at the expert level in > 93% of cases. • Location detection and contouring of the vessel boundaries were performed fully-automatic with results being available instantaneously compared to human assessments which approximately takes three minutes per location. • The evaluated tool indicates usability in daily practice.

Indexed as

Deep LearningAdultAgedBlood Flow VelocityFemaleHemodynamicsHumansMagnetic Resonance ImagingMagnetic Resonance Imaging, CineMiddle AgedBlood flowBlood flow velocityDeep learningMagnetic resonance imagingPulmonary artery

Identifiers

PMID36307551
PMCPMC9935671
OpenAlexW4307582719

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.