Evidence map›Paper›PMID 36307413›Full record

ArticleNature communications2022

Light activation of Orange Carotenoid Protein reveals bicycle-pedal single-bond isomerization.

Volha U Chukhutsina, James M Baxter, Alisia Fadini, Rhodri M Morgan, Matthew A Pope, Karim Maghlaoui, Christian M Orr, Armin Wagner, Jasper J van Thor

Open access · goldAbstract read
In one paragraph

Article in Nature communications, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
1.9field-weighted citation impact, top 13% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed, 26 citations in OpenAlex.

  1. Article
  2. Atomistic simulations reveal the photoactivation mechanism of a carotenoid-binding photoreceptor.Proceedings of the National Academy of Sciences of the United States of America · 2026
    Article
  3. Article
  4. Article
  5. Article
  6. Review
  7. Utilizing anomalous signals for element identification in macromolecular crystallography.Acta crystallographica. Section D, Structural biology · 2024
    Article
  8. Review
  9. Article
  10. Article
  11. Light-induced infrared difference spectroscopy on three different forms of orange carotenoid protein: focus on carotenoid vibrations.Photochemical & photobiological sciences : Official journal of the European Photochemistry Association and the European Society for Photobiology · 2023
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 2 institutions in 1 country.

Volha U ChukhutsinaDepartment of Life Sciences, Imperial College London, London, SW7 2AZ, UK.
James M BaxterDepartment of Life Sciences, Imperial College London, London, SW7 2AZ, UK.ORCID 0000-0002-4641-6760
Alisia FadiniDepartment of Life Sciences, Imperial College London, London, SW7 2AZ, UK.
Rhodri M MorganDepartment of Life Sciences, Imperial College London, London, SW7 2AZ, UK.ORCID 0000-0002-9760-3638
Matthew A PopeDepartment of Life Sciences, Imperial College London, London, SW7 2AZ, UK.
Karim MaghlaouiDepartment of Life Sciences, Imperial College London, London, SW7 2AZ, UK.
Christian M OrrDiamond Light Source, Harwell Science and Innovation Campus, Didcot, OX11 0DE, UK.
Armin WagnerDiamond Light Source, Harwell Science and Innovation Campus, Didcot, OX11 0DE, UK.ORCID 0000-0001-8995-7324
Jasper J van ThorDepartment of Life Sciences, Imperial College London, London, SW7 2AZ, UK. j.vanthor@imperial.ac.uk.ORCID 0000-0001-6356-3116
Imperial College London · GBDiamond Light Source · GB

Funding

Biotechnology and Biological Sciences Research Council BB/D524840/1Wellcome TrustWellcome Trust 202926/Z/16/Z
6 · The paper itself

Abstract

Orange Carotenoid protein (OCP) is the only known photoreceptor which uses carotenoid for its activation. It is found exclusively in cyanobacteria, where it functions to control light-harvesting of the photosynthetic machinery. However, the photochemical reactions and structural dynamics of this unique photosensing process are not yet resolved. We present time-resolved crystal structures at second-to-minute delays under bright illumination, capturing the early photoproduct and structures of the subsequent reaction intermediates. The first stable photoproduct shows concerted isomerization of C9'-C8' and C7'-C6' single bonds in the bicycle-pedal (s-BP) manner and structural changes in the N-terminal domain with minute timescale kinetics. These are followed by a thermally-driven recovery of the s-BP isomer to the dark state carotenoid configuration. Structural changes propagate to the C-terminal domain, resulting, at later time, in the H-bond rupture of the carotenoid keto group with protein residues. Solution FTIR and UV/Vis spectroscopy support the single bond isomerization of the carotenoid in the s-BP manner and subsequent thermal structural reactions as the basis of OCP photoreception.

Indexed as

Bacterial ProteinsBicyclingBisphenol A-Glycidyl MethacrylateCarotenoidsIsomerismLightBacterial ProteinsBisphenol A-Glycidyl MethacrylateCarotenoidssingle bond

Identifiers

PMID36307413
PMCPMC9616832
OpenAlexW4307847852

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.