Evidence map›Paper›PMID 36304905›Full record

ArticleBone reports2022

Signature of circulating small non-coding RNAs during early fracture healing in mice.

Matthieu Bourgery, Erika Ekholm, Ari Hiltunen, Terhi J Heino, Juha-Pekka Pursiheimo, Ameya Bendre, Emrah Yatkin, Tiina Laitala, Jorma Määttä, Anna-Marja Säämänen

Abstract read
In one paragraph

Article in Bone reports, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed.

  1. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors.

Matthieu BourgeryIntegrative Physiology and Pharmacology Unit, Institute of Biomedicine, University of Turku, Finland.
Erika EkholmIntegrative Physiology and Pharmacology Unit, Institute of Biomedicine, University of Turku, Finland.
Ari HiltunenTerveystalo, Turku, Finland.
Terhi J HeinoIntegrative Physiology and Pharmacology Unit, Institute of Biomedicine, University of Turku, Finland.
Juha-Pekka PursiheimoIntegrative Physiology and Pharmacology Unit, Institute of Biomedicine, University of Turku, Finland.
Ameya BendreIntegrative Physiology and Pharmacology Unit, Institute of Biomedicine, University of Turku, Finland.
Emrah YatkinCentral Animal Laboratory, University of Turku, Turku, Finland.
Tiina LaitalaIntegrative Physiology and Pharmacology Unit, Institute of Biomedicine, University of Turku, Finland.
Jorma MäättäIntegrative Physiology and Pharmacology Unit, Institute of Biomedicine, University of Turku, Finland.
Anna-Marja SäämänenIntegrative Physiology and Pharmacology Unit, Institute of Biomedicine, University of Turku, Finland.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Fracture healing is a complex process with multiple overlapping metabolic and differentiation phases. Small non-coding RNAs are involved in the regulation of fracture healing and their presence in circulation is under current interest due to their obvious value as potential biomarkers. Circulating microRNAs (miRNAs) have been characterized to some extent but the current knowledge on tRNA-derived small RNA fragments (tsRNAs) is relatively scarce, especially in circulation. In this study, the spectrum of circulating miRNAs and tsRNAs was analysed by next generation sequencing to show their differential expression during fracture healing in vivo. Analysed tsRNA fragments included stress-induced translation interfering tRNA fragments (tiRNAs or tRNA halves) and internal tRNA fragments (i-tRF), within the size range of 28-36 bp. To unveil the expression of these non-coding RNAs, genome-wide analysis was performed on two months old C57BL/6 mice on days 1, 5, 7, 10, and 14 (D1, D5, D7, D10, and D14) after a closed tibial fracture. Valine isoacceptor tRNA-derived Val-AAC 5'end and Val-CAC 5'end fragments were the major types of 5'end tiRNAs in circulation, comprising about 65 % of the total counts. Their expression was not affected by fracture. After a fracture, the levels of two 5'end tiRNAs Lys-TTT 5' and Lys-CTT 5' were decreased and His-GTG 5' was increased through D1-D14. The level of miR-451a was decreased on the first post-fracture day (D1), whereas miR-328-3p, miR-133a-3p, miR-375-3p, miR-423-5p, and miR-150-5p were increased post-fracture. These data provide evidence on how fracture healing could provoke systemic metabolic effects and further pinpoint the potential of small non-coding RNAs as biomarkers for tissue regeneration.

Indexed as

BiomarkerCirculating small non-coding RNAFracture healingi-tRF, internal tRNA fragmentmiRNAtiRNAtiRNA, stress-induced tRNA fragment, tRNA halvestsRNAtsRNA, transfer RNA derived small non-coding RNA fragment

Identifiers

PMID36304905
PMCPMC9593857

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.