Evidence map›Paper›PMID 36304479›Full record

ArticleaBIOTECH2021

Remodeling of the cell wall as a drought-tolerance mechanism of a soybean genotype revealed by global gene expression analysis.

Flaviane Silva Coutinho, Juliano Mendonça Rodrigues, Lucas Leal Lima, Rosilene Oliveira Mesquita, Paola Avelar Carpinetti, João Paulo Batista Machado, Camilo Elber Vital, Pedro Marcus Vidigal, Maria Eduarda Soares Ramos, Mariana Rocha Maximiano and 4 more

Open access · greenAbstract read
In one paragraph

Article in aBIOTECH, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
3.1field-weighted citation impact, top 9% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed, 24 citations in OpenAlex.

  1. Review
  2. Article
  3. Review
  4. Article
  5. Drought Response in the Transcriptome and Ionome of Wild and DomesticatedPlant-environment interactions (Hoboken, N.J.) · 2025
    Article
  6. Review
  7. Transcriptomic Profile of Tef (Plants (Basel, Switzerland) · 2024
    Article
  8. Article
  9. Alterations in the root phenylpropanoid pathway and root-shoot vessel system as main determinants of the drought tolerance of a soybean genotype.Physiology and molecular biology of plants : an international journal of functional plant biology · 2023
    Article
  10. Review
  11. Article
  12. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

14 authors at 4 institutions in 1 country.

Flaviane Silva CoutinhoDepartamento de Bioquímica e Biologia Molecular, Universidade Federal de Viçosa, Viçosa, Minas Gerais Brazil.
Juliano Mendonça RodriguesDepartamento de Bioquímica e Biologia Molecular, Universidade Federal de Viçosa, Viçosa, Minas Gerais Brazil.
Lucas Leal LimaDepartamento de Bioquímica e Biologia Molecular, Universidade Federal de Viçosa, Viçosa, Minas Gerais Brazil.
Rosilene Oliveira MesquitaDepartamento de Fitotecnia, Universidade Federal do Ceará, Fortaleza, Ceará Brazil.
Paola Avelar CarpinettiNúcleo de Análise de Biomoléculas (NuBioMol), Universidade Federal de Viçosa, Viçosa, Minas Gerais Brazil.
João Paulo Batista MachadoInstituto de Ciências Agrárias, Universidade Federal de Viçosa, Florestal, Minas Gerais Brazil.
Camilo Elber VitalNúcleo de Análise de Biomoléculas (NuBioMol), Universidade Federal de Viçosa, Viçosa, Minas Gerais Brazil.
Pedro Marcus VidigalNúcleo de Análise de Biomoléculas (NuBioMol), Universidade Federal de Viçosa, Viçosa, Minas Gerais Brazil.
Maria Eduarda Soares RamosDepartamento de Bioquímica e Biologia Molecular, Universidade Federal de Viçosa, Viçosa, Minas Gerais Brazil.
Mariana Rocha MaximianoEmbrapa Recursos Genéticos e Biotecnologia, Brasília, DF Brazil.
Angela MehtaEmbrapa Recursos Genéticos e Biotecnologia, Brasília, DF Brazil.
Maria Goreti Almeida OliveiraDepartamento de Bioquímica e Biologia Molecular, Universidade Federal de Viçosa, Viçosa, Minas Gerais Brazil.
Elizabeth Pacheco Batista FontesDepartamento de Bioquímica e Biologia Molecular, Universidade Federal de Viçosa, Viçosa, Minas Gerais Brazil.
Humberto Josué de Oliveira RamosDepartamento de Bioquímica e Biologia Molecular, Universidade Federal de Viçosa, Viçosa, Minas Gerais Brazil.ORCID 0000-0001-6447-8108
Universidade Federal de Viçosa · BRBrazilian Agricultural Research Corporation · BRUniversidade Federal de Juiz de Fora · BRUniversidade Federal do Ceará · BR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Drought stress is major abiotic stress that affects soybean production. Therefore, it is widely desirable that soybean becomes more tolerant to stress. To provide insights into regulatory mechanisms of the stress response, we compared the global gene expression profiles from leaves of two soybean genotypes that display different responses to water-deficit (BR 16 and Embrapa 48, drought-sensitive and drought-tolerant, respectively). After the RNA-seq analysis, a total of 5335 down-regulated and 3170 up-regulated genes were identified in the BR16. On the other hand, the number of genes differentially expressed was markedly lower in the Embrapa 48, 355 up-regulated and 471 down-regulated genes. However, induction and expression of protein kinases and transcription factors indicated signaling cascades involved in the drought tolerance. Overall, the results suggest that the metabolism of pectin is differently modulated in response to drought stress and may play a role in the soybean defense mechanism against drought. This occurs via an increase of the cell wall plasticity and crosslink, which contributed to a higher hydraulic conductance ( Supplementary Information: The online version contains supplementary material available at 10.1007/s42994-021-00043-4.

Indexed as

Gene expressionMolecular physiologyRNA-seqWater-use efficiency

Identifiers

PMID36304479
PMCPMC9590462
OpenAlexW3144418050

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.