Evidence map›Paper›PMID 36304269›Full record

ArticleFrontiers in bioinformatics2022

BioViz

Karthik Raveendran, Nowlan H Freese, Chaitanya Kintali, Srishti Tiwari, Pawan Bole, Chester Dias, Ann E Loraine

Abstract read
PubMed Full text at PMC Publisher
In one paragraph

Article in Frontiers in bioinformatics, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. Article
  2. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Karthik RaveendranDepartment of Bioinformatics and Genomics, University of North Carolina at Charlotte, Charlotte, NC, United States.
Nowlan H FreeseDepartment of Bioinformatics and Genomics, University of North Carolina at Charlotte, Charlotte, NC, United States.
Chaitanya KintaliDepartment of Bioinformatics and Genomics, University of North Carolina at Charlotte, Charlotte, NC, United States.
Srishti TiwariDepartment of Bioinformatics and Genomics, University of North Carolina at Charlotte, Charlotte, NC, United States.
Pawan BoleDepartment of Bioinformatics and Genomics, University of North Carolina at Charlotte, Charlotte, NC, United States.
Chester DiasDepartment of Bioinformatics and Genomics, University of North Carolina at Charlotte, Charlotte, NC, United States.
Ann E LoraineDepartment of Bioinformatics and Genomics, University of North Carolina at Charlotte, Charlotte, NC, United States.

Funding

Visualization software for genomicsR35GM139609 · NIGMS · UNIVERSITY OF NORTH CAROLINA CHARLOTTE · PI LORAINE, ANN E · 2021 to 2025
$1.8M
Linking Integrated Genome Browser and CyVerseR01GM121927 · NIGMS · UNIVERSITY OF NORTH CAROLINA CHARLOTTE · PI LORAINE, ANN E · 2017 to 2019
$674k
NIGMS NIH HHS R01 GM121927NIGMS NIH HHS R35 GM139609
6 · The paper itself

Abstract

Genomics researchers do better work when they can interactively explore and visualize data. Due to the vast size of experimental datasets, researchers are increasingly using powerful, cloud-based systems to process and analyze data. These remote systems, called science gateways, offer user-friendly, Web-based access to high performance computing and storage resources, but typically lack interactive visualization capability. In this paper, we present BioViz

Indexed as

abiotic stressArabidopsisAT1G07350CyVerseIntegrated Genome BrowserSR45aTerrain APIvisualization

Identifiers

PMID36304269
PMCPMC9580933

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.