Evidence map›Paper›PMID 36302174›Full record

ArticleClinical cancer research : an official journal of the American Association for Cancer Research2023

Oncogenic Addiction of Fibrolamellar Hepatocellular Carcinoma to the Fusion Kinase DNAJB1-PRKACA.

Christoph Neumayer, Denise Ng, Caroline S Jiang, Adam Qureshi, Gadi Lalazar, Roger Vaughan, Sanford M Simon

Open access · hybridAbstract read
In one paragraph

Article in Clinical cancer research : an official journal of the American Association for Cancer Research, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 26 papers.

0numbers the graph read from it
0cells of the map it votes in
26citing papers in PubMed
2.8field-weighted citation impact, top 8% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

26 citing papers in PubMed, 32 citations in OpenAlex.

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  11. Oncogenic gene fusions in cancer: from biology to therapy.Signal transduction and targeted therapy · 2025
    Review
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  13. Article
  14. Therapeutic, Clinicopathological, and Molecular Correlates ofPharmaceuticals (Basel, Switzerland) · 2024
    Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 2 institutions in 1 country.

Christoph NeumayerLaboratory of Cellular Biophysics, The Rockefeller University, New York, New York.ORCID 0000-0002-4260-3913
Denise NgLaboratory of Cellular Biophysics, The Rockefeller University, New York, New York.ORCID 0000-0002-4203-0780
Caroline S JiangHospital Biostatistics, The Rockefeller University, New York, New York.ORCID 0000-0001-6765-6280
Adam QureshiHospital Biostatistics, The Rockefeller University, New York, New York.ORCID 0000-0003-1987-2266
Gadi LalazarLaboratory of Cellular Biophysics, The Rockefeller University, New York, New York.ORCID 0000-0001-7392-3082
Roger VaughanHospital Biostatistics, The Rockefeller University, New York, New York.ORCID 0000-0002-1336-4079
Sanford M SimonLaboratory of Cellular Biophysics, The Rockefeller University, New York, New York.ORCID 0000-0002-8615-4224
Rockefeller University · USRockefeller University Hospital · US

Funding

Developing, Demonstrating, and Disseminating Innovative Programs to Achieve Translational SuccessUL1TR001866 · NCATS · ROCKEFELLER UNIVERSITY · PI COLLER, BARRY, KRUEGER, JAMES G · 2016 to 2025
$40.6M
Project 4: ImmunovirotherapyP50CA210964 · NCI · MAYO CLINIC ROCHESTER · PI Zongming Eric Chen · 2018 to 2026
$20.5M
What differences between the chimeric fusion oncoprotein DNAJB1-PRKACA and native kinase PRKACA lead to transformation in the childhood cancer, fibrolamellar hepatocellular carcinoma?U54CA243126 · NCI · ROCKEFELLER UNIVERSITY · PI SIMON, SANFORD M · 2019 to 2023
$5.4M
ASO and shRNA for targeting the oncogenic transcript driving fibrolamellar hepatocellular carcinomaR01CA248507 · NCI · ROCKEFELLER UNIVERSITY · PI SIMON, SANFORD M · 2020 to 2024
$2.1M
NCATS NIH HHS UL1 TR001866NCI NIH HHS P50 CA210964NCI NIH HHS R01 CA248507NCI NIH HHS U54 CA243126
6 · The paper itself

Abstract

purposeGene fusions are drivers of many pediatric tumors. In fibrolamellar hepatocellular carcinoma (FLC), a fusion of DNAJB1 and PRKACA is the dominant recurrent mutation. Expression of the DNAJB1-PRKACA fusion gene in mice results in a tumor that recapitulates FLC. However, it is not known whether transient expression of DNAJB1-PRKACA is sufficient only to trigger tumor formation or whether ongoing expression is necessary for maintenance and progression. EXPERIMENTAL

designWe screened short hairpin RNAs (shRNA) tiled over the fusion junction and identified several potent and specific candidates in vitro and two independent FLC patient-derived xenografts (PDX).

resultsWe show that continued DNAJB1-PRKACA expression is not only required for continued tumor growth, but additionally its inhibition results in cell death. Inhibition of DNAJB1-PRKACA by an inducible shRNA in cells of PDX of FLC resulted in cell death in vitro. Induction of the shRNA inhibits FLC tumors growing in mice with no effect on xenografts from a hepatocellular carcinoma cell line engineered to express DNAJB1-PRKACA.

conclusionsOur results validate DNAJB1-PRKACA as the oncogene in FLC and demonstrate both a continued requirement for the oncogene for tumor growth as well as an oncogenic addiction that can be exploited for targeted therapies. We anticipate our approach will be useful for investigations of other fusion genes in pediatric cancers and spur development of precision therapies.

Indexed as

Carcinoma, HepatocellularLiver NeoplasmsAnimalsCyclic AMP-Dependent Protein Kinase Catalytic SubunitsHSP40 Heat-Shock ProteinsHumansMiceOncogene AddictionRNA, Small InterferingCyclic AMP-Dependent Protein Kinase Catalytic SubunitsDNAJB1 protein, humanHSP40 Heat-Shock ProteinsPRKACA protein, humanRNA, Small Interfering

Identifiers

PMID36302174
PMCPMC9811160
OpenAlexW4307502948

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.