Evidence map›Paper›PMID 36302021›Full record

ArticleScience (New York, N.Y.)2022

Evolution and antiviral activity of a human protein of retroviral origin.

John A Frank, Manvendra Singh, Harrison B Cullen, Raphael A Kirou, Meriem Benkaddour-Boumzaouad, Jose L Cortes, Jose Garcia Pérez, Carolyn B Coyne, Cédric Feschotte

Open access · greenAbstract read
In one paragraph

Article in Science (New York, N.Y.), 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 60 papers.

0numbers the graph read from it
0cells of the map it votes in
60citing papers in PubMed
15.8field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

60 citing papers in PubMed, 81 citations in OpenAlex.

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  12. Genetic Diversity in theBiomolecules · 2025
    Article
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  15. Article
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4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

9 authors at 5 institutions in 3 countries.

John A FrankDepartment of Molecular Biology and Genetics, Cornell University, Ithaca, NY, USA.ORCID 0000-0002-3659-5443
Manvendra SinghDepartment of Molecular Biology and Genetics, Cornell University, Ithaca, NY, USA.
Harrison B CullenDepartment of Molecular Biology and Genetics, Cornell University, Ithaca, NY, USA.ORCID 0000-0003-1247-8186
Raphael A KirouDepartment of Molecular Biology and Genetics, Cornell University, Ithaca, NY, USA.ORCID 0000-0001-6481-4810
Meriem Benkaddour-BoumzaouadGENYO Centre for Genomics and Oncological Research, Pfizer/University of Granada/Andalusian Regional Government, PTS Granada, Spain.
Jose L CortesGENYO Centre for Genomics and Oncological Research, Pfizer/University of Granada/Andalusian Regional Government, PTS Granada, Spain.
Jose Garcia PérezGENYO Centre for Genomics and Oncological Research, Pfizer/University of Granada/Andalusian Regional Government, PTS Granada, Spain.ORCID 0000-0002-8132-9849
Carolyn B CoyneDepartment of Molecular Genetics and Microbiology, Duke University School of Medicine, Durham, NC, USA.ORCID 0000-0002-1884-6309
Cédric FeschotteDepartment of Molecular Biology and Genetics, Cornell University, Ithaca, NY, USA.ORCID 0000-0002-8772-6976
Cornell University · USC.P.Q. Ibérica (Spain) · ESDuke University · USPfizer-University of Granada-Junta de Andalucía Centre for Genomics and Oncological Research · ESWestern General Hospital · GB

Funding

Training Program in Microbial PathogenesisT32AI055434 · NIAID · UTAH STATE HIGHER EDUCATION SYSTEM--UNIVERSITY OF UTAH · PI MULVEY, MATTHEW A, PLANELLES, VICENTE · 2004 to 2025
$6.0M
Genomic and Physiological Impact of Transposable Elements.R35GM122550 · NIGMS · CORNELL UNIVERSITY · PI Cedric Feschotte · 2017 to 2026
$4.4M
Innate immune signaling in placental antiviral defensesR01AI145828 · NIAID · UNIVERSITY OF PITTSBURGH AT PITTSBURGH · PI COYNE, CAROLYN B, DIAMOND, MICHAEL S · 2019 to 2023
$3.5M
Endogenous Retroviruses Co-Opted for Immune DefensesR01GM112972 · NIGMS · UNIVERSITY OF UTAH · PI FESCHOTTE, CEDRIC · 2015 to 2017
$804k
NIAID NIH HHS R01 AI145828NIGMS NIH HHS R01 GM112972NIGMS NIH HHS R35 GM122550Wellcome Trust
6 · The paper itself

Abstract

Endogenous retroviruses are abundant components of mammalian genomes descended from ancient germline infections. In several mammals, the envelope proteins encoded by these elements protect against exogenous viruses, but this activity has not been documented with endogenously expressed envelopes in humans. We report that the human genome harbors a large pool of envelope-derived sequences with the potential to restrict retroviral infection. To test this, we characterized an envelope-derived protein, Suppressyn. We found that

Indexed as

BetaretrovirusEvolution, MolecularGene Products, envPlacentaPlacentationPregnancy ProteinsAnimalsFemaleGenome, HumanHumansPregnancyERVH48-1 protein, humanGene Products, envPregnancy Proteins

Identifiers

PMID36302021
PMCPMC10542854
OpenAlexW4307412666

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.