Evidence map›Paper›PMID 36301967›Full record

ArticlePloS one2022

Deciphering the mechanism of anhydrobiosis in the entomopathogenic nematode Heterorhabditis indica through comparative transcriptomics.

Manimaran Balakumaran, Parameshwaran Chidambaranathan, Jagannadham Prasanth Tej Kumar J P, Anil Sirohi, Pradeep Kumar Jain, Kishore Gaikwad, Yuvaraj Iyyappan, Atmakuri Ramakrishna Rao, Sarika Sahu, Anil Dahuja and 1 more

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
1.8field-weighted citation impact, top 16% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed, 9 citations in OpenAlex.

  1. Biomolecular condensates-Prerequisites for anhydrobiosis?Protein science : a publication of the Protein Society · 2025
    Review
  2. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 3 institutions in 1 country.

Manimaran BalakumaranDivision of Nematology, ICAR-Indian Agricultural Research Institute, New Delhi, India.ORCID 0000-0001-9573-6608
Parameshwaran ChidambaranathanICAR-National Institute for Plant Biotechnology, New Delhi, India.
Jagannadham Prasanth Tej Kumar J PICAR-National Institute for Plant Biotechnology, New Delhi, India.
Anil SirohiDivision of Nematology, ICAR-Indian Agricultural Research Institute, New Delhi, India.
Pradeep Kumar JainICAR-National Institute for Plant Biotechnology, New Delhi, India.
Kishore GaikwadICAR-National Institute for Plant Biotechnology, New Delhi, India.
Yuvaraj IyyappanICAR-National Institute for Plant Biotechnology, New Delhi, India.
Atmakuri Ramakrishna RaoCentre for Agricultural Bioinformatics, ICAR-Indian Agricultural Statistics Research Institute, New Delhi, India.
Sarika SahuCentre for Agricultural Bioinformatics, ICAR-Indian Agricultural Statistics Research Institute, New Delhi, India.
Anil DahujaDivision of Biochemistry, ICAR-Indian Agricultural Research Institute, New Delhi, India.ORCID 0000-0001-8263-4071
Sharad MohanDivision of Nematology, ICAR-Indian Agricultural Research Institute, New Delhi, India.ORCID 0000-0001-5856-2274
National Research Centre on Plant Biotechnology · INIndian Agricultural Research Institute · INIndian Agricultural Statistics Research Institute · IN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The entomopathogenic nematode, Heterorhabditis indica, is a popular biocontrol agent of high commercial significance. It possesses tremendous genetic architecture to survive desiccation stress by undergoing anhydrobiosis to increase its lifespan-an attribute exploited in the formulation technology. The comparative transcriptome of unstressed and anhydrobiotic H. indica revealed several previously concealed metabolic events crucial for adapting towards the moisture stress. During the induction of anhydrobiosis in the infective juveniles (IJ), 1584 transcripts were upregulated and 340 downregulated. As a strategy towards anhydrobiotic survival, the IJ showed activation of several genes critical to antioxidant defense, detoxification pathways, signal transduction, unfolded protein response and molecular chaperones and ubiquitin-proteasome system. Differential expression of several genes involved in gluconeogenesis - β-oxidation of fatty acids, glyoxylate pathway; glyceroneogenesis; fatty acid biosynthesis; amino-acid metabolism - shikimate pathway, sachharopine pathway, kyneurine pathway, lysine biosynthesis; one-carbon metabolism-polyamine pathway, transsulfuration pathway, folate cycle, methionine cycle, nucleotide biosynthesis; mevalonate pathway; and glyceraldehyde-3-phosphate dehydrogenase were also observed. We report the role of shikimate pathway, sachharopine pathway and glyceroneogenesis in anhydrobiotes, and seven classes of repeat proteins, specifically in H. indica for the first time. These results provide insights into anhydrobiotic survival strategies which can be utilized to strengthen the development of novel formulations with enhanced and sustained shelf-life.

Indexed as

NematodaTranscriptomeAnimalsCarbohydrate MetabolismDesiccation

Identifiers

PMID36301967
PMCPMC9612587
OpenAlexW4307441033

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.