Evidence map›Paper›PMID 36301240›Full record

ArticleThe Journal of infectious diseases2023

Outpatient Clonal Propagation and Rapid Regional Establishment of an Emergent Carbapenem-Resistant Acinetobacter baumannnii Lineage Sequence Type 499Pas.

Juan J Calix, Maria C Stockler de Almeida, Robert F Potter, Meghan A Wallace, Carey-Ann D Burnham, Gautam Dantas

Open access · greenAbstract read
In one paragraph

Article in The Journal of infectious diseases, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
0.5field-weighted citation impact, top 44% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 7 citations in OpenAlex.

  1. Article
  2. Review
  3. Article
  4. Clinical Outcomes and Bacterial Characteristics of Carbapenem-resistant Acinetobacter baumannii Among Patients From Different Global Regions.Clinical infectious diseases : an official publication of the Infectious Diseases Society of America · 2024
    Observational
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 1 institution in 1 country.

Juan J CalixDivision of Infectious Diseases, Washington University School of Medicine in St. Louis, St. Louis, Missouri, USA.ORCID 0000-0003-0424-6721
Maria C Stockler de AlmeidaDepartment of Medicine, University of Sao Paolo, Sao Paolo, Brazil.
Robert F PotterDepartment of Pathology and Immunology, Washington University School of Medicine in St. Louis, St. Louis, Missouri, USA.
Meghan A WallaceDepartment of Pathology and Immunology, Washington University School of Medicine in St. Louis, St. Louis, Missouri, USA.
Carey-Ann D BurnhamDivision of Infectious Diseases, Washington University School of Medicine in St. Louis, St. Louis, Missouri, USA.
Gautam DantasThe Edison Family Center for Genome Sciences and Systems Biology, Washington University School of Medicine in St. Louis, St. Louis, Missouri, USA.ORCID 0000-0003-0455-8370
Washington University in St. Louis · US

Funding

STRUCTURAL, MECHANISTIC, & EVOLUTIONARY CHARACTERIZATION OF TETRACYCLINE DESTRUCTASESU01AI123394 · NIAID · WASHINGTON UNIVERSITY · PI DANTAS, GAUTAM, WENCEWICZ, TIMOTHY ADAM · 2020 to 2025
$4.1M
PHYLOGENOMIC, TRANSCRIPTOMIC, VIROMIC, AND IMMUNOPROTEOMIC DETERMINANTS OF NECROTIZING ENTEROCOLITISR01HD092414 · NICHD · WASHINGTON UNIVERSITY · PI DANTAS, GAUTAM, TARR, PHILLIP I · 2017 to 2021
$3.0M
Defining microbial and host determinants of Acinetobacter survival in the urinary tractK08AI148582 · NIAID · WASHINGTON UNIVERSITY · PI CALIX, JUAN JOSE · 2020 to 2024
$714k
NIAID NIH HHS K08 AI148582NIAID NIH HHS U01 AI123394NICHD NIH HHS R01 HD092414
6 · The paper itself

Abstract

Eliminating carbapenem-resistant Acinetobacter baumannii (CRAb) disease requires comprehensive knowledge of how this noncommensal organism propagates among at-risk hosts. We molecularly characterized an ongoing surge of CRAb cases among patients in a Midwest US healthcare system, which coincided with sustained reductions in hospital-acquired CRAb infections and falloffs of cases associated with distinctly more resistant antibiotypes. Genome sequencing revealed surge isolates belonged to an emergent Pasteur scheme sequence type 499 and comprised multiple contemporaneous clonal clusters. Detailed query of health records revealed no consistent hospital source but instead identified various outpatient healthcare settings linked to cluster cases. We show that CRAb can rapidly establish a regional presence even without gains in breadth of antibiotic resistance and negligible contribution from sustained intrahospital transmission. As CRAb lineages may sidestep control efforts via outpatient epidemiological niches, our approach can be implemented to investigate outpatient CRAb propagation and inform subsequent local surveillance outside hospital settings.

Indexed as

Acinetobacter baumanniiAcinetobacter InfectionsCross InfectionAnti-Bacterial AgentsBacterial Proteinsbeta-LactamasesCarbapenemsHumansMicrobial Sensitivity TestsMultilocus Sequence TypingOutpatientsAnti-Bacterial AgentsBacterial Proteinsbeta-LactamasesCarbapenemsAcinetobacter baumanniidrug resistancehealthcare-associated infectionsmolecular epidemiology

Identifiers

PMID36301240
PMCPMC10152498
OpenAlexW4307430593

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.