Evidence map›Paper›PMID 36300946›Full record

ArticlemSystems2022

Quantitative Stable-Isotope Probing (qSIP) with Metagenomics Links Microbial Physiology and Activity to Soil Moisture in Mediterranean-Climate Grassland Ecosystems.

Alex Greenlon, Ella Sieradzki, Olivier Zablocki, Benjamin J Koch, Megan M Foley, Jeffrey A Kimbrel, Bruce A Hungate, Steven J Blazewicz, Erin E Nuccio, Christine L Sun and 6 more

Open access · goldAbstract read
In one paragraph

Article in mSystems, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 23 papers.

0numbers the graph read from it
0cells of the map it votes in
23citing papers in PubMed
4.5field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

23 citing papers in PubMed, 37 citations in OpenAlex.

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  8. A genomic view of Earth's biomes.Nature reviews. Genetics · 2026
    Review
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  11. Codon bias, nucleotide selection, and genome size predict in situ bacterial growth rate and transcription in rewetted soil.Proceedings of the National Academy of Sciences of the United States of America · 2025
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

16 authors at 5 institutions in 1 country.

Alex GreenlonDepartment of Environmental Science, Policy and Management, University California, Berkeley, Berkley, California, USA.
Ella SieradzkiDepartment of Environmental Science, Policy and Management, University California, Berkeley, Berkley, California, USA.
Olivier ZablockiDepartment of Microbiology, Ohio State University, Columbus, Ohio, USA.
Benjamin J KochCenter for Ecosystem Science and Society, Northern Arizona Universitygrid.261120.6, Flagstaff, Arizona, USA.
Megan M FoleyCenter for Ecosystem Science and Society, Northern Arizona Universitygrid.261120.6, Flagstaff, Arizona, USA.
Jeffrey A KimbrelPhysical and Life Sciences Directorate, Lawrence Livermore National Laboratorygrid.250008.f, Livermore, California, USA.
Bruce A HungateCenter for Ecosystem Science and Society, Northern Arizona Universitygrid.261120.6, Flagstaff, Arizona, USA.ORCID 0000-0002-7337-1887
Steven J BlazewiczPhysical and Life Sciences Directorate, Lawrence Livermore National Laboratorygrid.250008.f, Livermore, California, USA.
Erin E NuccioPhysical and Life Sciences Directorate, Lawrence Livermore National Laboratorygrid.250008.f, Livermore, California, USA.
Christine L SunDepartment of Microbiology, Ohio State University, Columbus, Ohio, USA.
Aaron ChewDepartment of Environmental Science, Policy and Management, University California, Berkeley, Berkley, California, USA.
Cynthia-Jeanette MancillaDepartment of Environmental Science, Policy and Management, University California, Berkeley, Berkley, California, USA.
Matthew B SullivanDepartment of Microbiology, Ohio State University, Columbus, Ohio, USA.
Mary FirestoneDepartment of Environmental Science, Policy and Management, University California, Berkeley, Berkley, California, USA.ORCID 0000-0002-4289-3244
Jennifer Pett-RidgePhysical and Life Sciences Directorate, Lawrence Livermore National Laboratorygrid.250008.f, Livermore, California, USA.ORCID 0000-0002-4439-2398
Jillian F BanfieldDepartment of Environmental Science, Policy and Management, University California, Berkeley, Berkley, California, USA.ORCID 0000-0001-8203-8771
University of California, Berkeley · USLawrence Livermore National Laboratory · USNorthern Arizona University · USThe Ohio State University · USPlanetary Science Institute · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The growth and physiology of soil microorganisms, which play vital roles in biogeochemical cycling, are shaped by both current and historical soil environmental conditions. Here, we developed and applied a genome-resolved metagenomic implementation of quantitative stable isotope probing (qSIP) with an H

Indexed as

EcosystemSoil MicrobiologyBacteriaCarbonDNAGrasslandIsotopesSoilCarbonDNAIsotopesSoilmetagenome-assembled genomesmetagenomicssoil microbiomesoil moisturestable isotope probing

Identifiers

PMID36300946
PMCPMC9765451
OpenAlexW4307433106

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.