Evidence map›Paper›PMID 36300632›Full record

ArticleeLife2022

Z-REX uncovers a bifurcation in function of Keap1 paralogs.

Alexandra Van Hall-Beauvais, Jesse R Poganik, Kuan-Ting Huang, Saba Parvez, Yi Zhao, Hong-Yu Lin, Xuyu Liu, Marcus John Curtis Long, Yimon Aye

Open access · goldAbstract read
In one paragraph

Article in eLife, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
1.0field-weighted citation impact, top 26% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 13 citations in OpenAlex.

  1. Review
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  5. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 7 institutions in 4 countries.

Alexandra Van Hall-Beauvais *Swiss Federal Institute of Technology Lausanne, Lausanne, Switzerland.ORCID https://orcid.org/0000-0003-2515-5191
Jesse R Poganik *Swiss Federal Institute of Technology Lausanne, Lausanne, Switzerland.
Kuan-Ting Huang *Swiss Federal Institute of Technology Lausanne, Lausanne, Switzerland.ORCID https://orcid.org/0000-0001-7057-1448
Saba ParvezDepartment of Pharmacology and Toxicology, College of Pharmacy, University of Utah, Salt Lake City, United States.
Yi ZhaoSwiss Federal Institute of Technology Lausanne, Lausanne, Switzerland.ORCID https://orcid.org/0000-0002-6049-1943
Hong-Yu LinDepartment of Chemical Biology, College of Chemistry and Chemical Engineering, Xiamen University, Xiamen, China.
Xuyu LiuSwiss Federal Institute of Technology Lausanne, Lausanne, Switzerland.
Marcus John Curtis LongDepartment of Biochemistry, Faculty of Biology and Medicine, University of Lausanne, Lausanne, Switzerland.
Yimon AyeSwiss Federal Institute of Technology Lausanne, Lausanne, Switzerland.ORCID https://orcid.org/0000-0002-1256-4159
École Polytechnique Fédérale de Lausanne · CHBrigham and Women's Hospital · USShenzhen Bay Laboratory · CNThe University of Sydney · AUUniversity of Lausanne · CHUniversity of Utah · USXiamen University · CN

Funding

CHEMISTRY OF BIOLOGICAL SYSTEMST32GM008500 · NIGMS · CORNELL UNIVERSITY ITHACA · PI LIN, HENING · 1996 to 2020
$5.4M
Howard Hughes Medical InstituteNIGMS NIH HHS T32 GM008500
6 · The paper itself

Abstract

Studying electrophile signaling is marred by difficulties in parsing changes in pathway flux attributable to on-target, vis-à-vis off-target, modifications. By combining bolus dosing, knockdown, and Z-REX-a tool investigating on-target/on-pathway electrophile signaling, we document that electrophile labeling of one zebrafish-Keap1-paralog (zKeap1b) stimulates Nrf2- driven antioxidant response (AR) signaling (like the human-ortholog). Conversely, zKeap1a is a dominant-negative regulator of electrophile-promoted Nrf2-signaling, and itself is nonpermissive for electrophile-induced Nrf2-upregulation. This behavior is recapitulated in human cells: (1) zKeap1b-expressing cells are permissive for augmented AR-signaling through reduced zKeap1b-Nrf2 binding following whole-cell electrophile treatment; (2) zKeap1a-expressing cells are non-permissive for AR-upregulation, as zKeap1a-Nrf2 binding capacity remains unaltered upon whole-cell electrophile exposure; (3) 1:1 ZKeap1a:zKeap1b-co-expressing cells show no Nrf2-release from the Keap1-complex following whole-cell electrophile administration, rendering these cells unable to upregulate AR. We identified a zKeap1a-specific point-mutation (C273I) responsible for zKeap1a's behavior during electrophilic stress. Human-Keap1(C273I), of known diminished Nrf2-regulatory capacity, dominantly muted electrophile-induced Nrf2-signaling. These studies highlight divergent and interdependent

Indexed as

NF-E2-Related Factor 2ZebrafishAnimalsAntioxidantsHumansKelch-Like ECH-Associated Protein 1Signal TransductionAntioxidantsKEAP1 protein, humanKelch-Like ECH-Associated Protein 1NF-E2-Related Factor 2biochemistrychemical biologycovalent drug mode-of-actionelectrophile signalingKeap1/Nrf2 antioxidant responseparalog-specific signalingREX technologieszebrafish

Identifiers

PMID36300632
PMCPMC9754640
OpenAlexW4307362500

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.