Evidence map›Paper›PMID 36298655›Full record

ArticleViruses2022

Genomic Variability of Hepatitis B Virus Circulating in Brazilian Western Amazon.

Tárcio Peixoto Roca, Livia Melo Villar, Felipe Souza Nogueira Lima, Mariana Pinheiro Alves Vasconcelos, Lourdes Maria Pinheiro Borzacov, Eugênia de Castro E Silva, Bárbara Vieira do Lago, Mayara Torquato Lima da Silva, Luan Felipo Botelho Souza, Juan Miguel Villalobos Salcedo and 2 more

Abstract read
In one paragraph

Article in Viruses, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed.

  1. Article
  2. Article
  3. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors.

Tárcio Peixoto RocaLaboratory of Viral Hepatitis, Oswaldo Cruz Institute, FIOCRUZ, Rio de Janeiro 21040-900, Brazil.ORCID 0000-0003-0203-0409
Livia Melo VillarLaboratory of Viral Hepatitis, Oswaldo Cruz Institute, FIOCRUZ, Rio de Janeiro 21040-900, Brazil.ORCID 0000-0001-7644-8969
Felipe Souza Nogueira LimaLaboratory of Molecular Virology, Oswaldo Cruz Foundation of Rondônia-FIOCRUZ/RO, Porto Velho 76812-245, Brazil.
Mariana Pinheiro Alves VasconcelosTropical Medicine Research Center of Rondônia-CEPEM/RO, Porto Velho 76812-329, Brazil.
Lourdes Maria Pinheiro BorzacovTropical Medicine Research Center of Rondônia-CEPEM/RO, Porto Velho 76812-329, Brazil.
Eugênia de Castro E SilvaTropical Medicine Research Center of Rondônia-CEPEM/RO, Porto Velho 76812-329, Brazil.
Bárbara Vieira do LagoLaboratory of Viral Hepatitis, Oswaldo Cruz Institute, FIOCRUZ, Rio de Janeiro 21040-900, Brazil.ORCID 0000-0002-9173-6309
Mayara Torquato Lima da SilvaLaboratory of Biotechnology and Structural Bioengineering, Biophysics Institute Carlos Chagas Filho, Federal University of Rio de Janeiro, Rio de Janeiro 21941-901, Brazil.
Luan Felipo Botelho SouzaSchool of Biomedical Sciences, Aparicio Carvalho University Center, Porto Velho 76811-678, Brazil.ORCID 0000-0002-3522-3306
Juan Miguel Villalobos SalcedoLaboratory of Molecular Virology, Oswaldo Cruz Foundation of Rondônia-FIOCRUZ/RO, Porto Velho 76812-245, Brazil.
Alcione de Oliveira Dos SantosSchool of Biomedical Sciences, Aparicio Carvalho University Center, Porto Velho 76811-678, Brazil.ORCID 0000-0001-9476-0761
Deusilene Souza VieiraLaboratory of Molecular Virology, Oswaldo Cruz Foundation of Rondônia-FIOCRUZ/RO, Porto Velho 76812-245, Brazil.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The emergence of clinically relevant mutations in the hepatitis B virus (HBV) genome has been a matter of great debate because of the possibility of escape from the host's immune system, the potential to cause more severe progression of liver diseases and the emergence of treatment-resistant variants. Here we characterized the circulating variants of HBV in Rondônia State, in the north of Brazil. Serum samples of 62 chronic HBV carriers were subjected to PCR assays and clinical data were collected. Mutations and genotypes were characterized through direct sequencing. The findings show the presence of subgenotypes A1 (54.83%, 34/62), D3 (16.13%, 10/62), F2 (16.13%, 10/62), A2 (4.84%, 3/62), D2 (3.23%, 2/62), D1 (1.61%, 1/62), D4 (1.61%, 1/62) and F4 (1.61%, 1/62). Deletions in the pre-S2 region were found in 13.79% (8/58) of the samples, mutations in the S gene in 59.68% (37/62) and RT mutations in 48.39% (30/62). We found a variable genotypic distribution in different locations and important mutations related to immune escape and drug resistance in Western Amazonia, which contributed to genetic surveillance and provided important information to help control the disease.

Indexed as

Hepatitis BHepatitis B, ChronicBrazilDNA, ViralGenomicsGenotypeHepatitis B Surface AntigensHepatitis B virusHumansMutationPhylogenyDNA, ViralHepatitis B Surface Antigensclinical characterizationgenotypemutation

Identifiers

PMID36298655
PMCPMC9611064

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.