Evidence map›Paper›PMID 36296178›Full record

ArticleMicroorganisms2022

Intronization Signatures in Coding Exons Reveal the Evolutionary Fluidity of Eukaryotic Gene Architecture.

Judith Ryll, Rebecca Rothering, Francesco Catania

Open access · goldAbstract read
In one paragraph

Article in Microorganisms, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
0.6field-weighted citation impact, top 35% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 8 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Annual review of genetics · 2023
    Review
  5. A Review for the Special Issue onMicroorganisms · 2023
    Review
  6. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 1 institution in 2 countries.

Judith RyllInstitute for Evolution and Biodiversity, University of Münster, Hüfferstrasse 1, 48149 Münster, Germany.ORCID 0000-0003-2679-4040
Rebecca RotheringInstitute for Evolution and Biodiversity, University of Münster, Hüfferstrasse 1, 48149 Münster, Germany.ORCID 0000-0003-0284-4736
Francesco CataniaInstitute for Evolution and Biodiversity, University of Münster, Hüfferstrasse 1, 48149 Münster, Germany.ORCID 0000-0002-2652-9397
University of Münster · DE

Funding

Deutsche Forschungsgemeinschaft RTG2220 - 281125614
6 · The paper itself

Abstract

The conventionally clear distinction between exons and introns in eukaryotic genes is actually blurred. To illustrate this point, consider sequences that are retained in mature mRNAs about 50% of the time: how should they be classified? Moreover, although it is clear that RNA splicing influences gene expression levels and is an integral part of interdependent cellular networks, introns continue to be regarded as accidental insertions; exogenous sequences whose evolutionary origin is independent of mRNA-associated processes and somewhat still elusive. Here, we present evidence that aids to resolve this disconnect between conventional views about introns and current knowledge about the role of RNA splicing in the eukaryotic cell. We first show that coding sequences flanked by cryptic splice sites are negatively selected on a genome-wide scale in

Indexed as

alternative splicingexonexonizationgene architecturegene expressionintronintronizationpurifying selectionRNA splicing

Identifiers

PMID36296178
PMCPMC9612004
OpenAlexW4297229234

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.