Evidence map›Paper›PMID 36296143›Full record

ArticleMicromachines2022

Adaptive Feature Extraction for Blood Vessel Segmentation and Contrast Recalculation in Laser Speckle Contrast Imaging.

Eduardo Morales-Vargas, Juan Pablo Padilla-Martinez, Hayde Peregrina-Barreto, Wendy Argelia Garcia-Suastegui, Julio Cesar Ramirez-San-Juan

Abstract read
In one paragraph

Article in Micromachines, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Eduardo Morales-VargasInstituto Nacional de Astrofísica, Óptica y Electrónica, Luis Enrique Erro 1, Santa Maria Tonantzintla, San Andres Cholula 72840, Mexico.ORCID 0000-0001-5799-0955
Juan Pablo Padilla-MartinezInstituto de Ciencias, Benemérita Universidad Autónoma de Puebla, Puebla 72000, Mexico.
Hayde Peregrina-BarretoInstituto Nacional de Astrofísica, Óptica y Electrónica, Luis Enrique Erro 1, Santa Maria Tonantzintla, San Andres Cholula 72840, Mexico.ORCID 0000-0002-8623-091X
Wendy Argelia Garcia-SuasteguiInstituto de Ciencias, Benemérita Universidad Autónoma de Puebla, Puebla 72000, Mexico.ORCID 0000-0001-5223-3189
Julio Cesar Ramirez-San-JuanInstituto Nacional de Astrofísica, Óptica y Electrónica, Luis Enrique Erro 1, Santa Maria Tonantzintla, San Andres Cholula 72840, Mexico.ORCID 0000-0002-4720-2668

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Microvasculature analysis in biomedical images is essential in the medical area to evaluate diseases by extracting properties of blood vessels, such as relative blood flow or morphological measurements such as diameter. Given the advantages of Laser Speckle Contrast Imaging (LSCI), several studies have aimed to reduce inherent noise to distinguish between tissue and blood vessels at higher depths. These studies have shown that computing Contrast Images (CIs) with Analysis Windows (AWs) larger than standard sizes obtains better statistical estimators. The main issue is that larger samples combine pixels of microvasculature with tissue regions, reducing the spatial resolution of the CI. This work proposes using adaptive AWs of variable size and shape to calculate the features required to train a segmentation model that discriminates between blood vessels and tissue in LSCI. The obtained results show that it is possible to improve segmentation rates of blood vessels up to 45% in high depths (≈900 μm) by extracting features adaptively. The main contribution of this work is the experimentation with LSCI images under different depths and exposure times through adaptive processing methods, furthering the understanding the performance of the different approaches under these conditions. Results also suggest that it is possible to train a segmentation model to discriminate between pixels belonging to blood vessels and those belonging to tissue. Therefore, an adaptive feature extraction method may improve the quality of the features and thus increase the classification rates of blood vessels in LSCI.

Indexed as

adaptive processingblood vessel segmentationlaser speckle contrast imagingmathematical morphology

Identifiers

PMID36296143
PMCPMC9609016

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.