Evidence map›Paper›PMID 36293436›Full record

ArticleInternational journal of molecular sciences2022

SERS-PLSR Analysis of Vaginal Microflora: Towards the Spectral Library of Microorganisms.

Sylwia Magdalena Berus, Monika Adamczyk-Popławska, Katarzyna Goździk, Grażyna Przedpełska, Tomasz R Szymborski, Yuriy Stepanenko, Agnieszka Kamińska

Open access · goldAbstract read
In one paragraph

Article in International journal of molecular sciences, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
2.6field-weighted citation impact, top 10% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 10 citations in OpenAlex.

  1. Article
  2. Article
  3. Review
  4. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 2 institutions in 1 country.

Sylwia Magdalena BerusInstitute of Physical Chemistry, Polish Academy of Sciences, Kasprzaka 44/52, 01-224 Warsaw, Poland.ORCID 0000-0003-1321-3884
Monika Adamczyk-PopławskaDepartment of Molecular Virology, Faculty of Biology, University of Warsaw, Miecznikowa 1, 02-096 Warsaw, Poland.ORCID 0000-0002-5885-9550
Katarzyna GoździkDepartment of Parasitology, Faculty of Biology, University of Warsaw, Miecznikowa 1, 02-096 Warsaw, Poland.ORCID 0000-0002-7051-9524
Grażyna PrzedpełskaDepartment of Dermatology and Venerology, Infant Jesus Clinical Hospital, Koszykowa 82a, 02-008 Warsaw, Poland.
Tomasz R SzymborskiInstitute of Physical Chemistry, Polish Academy of Sciences, Kasprzaka 44/52, 01-224 Warsaw, Poland.ORCID 0000-0002-7308-0609
Yuriy StepanenkoInstitute of Physical Chemistry, Polish Academy of Sciences, Kasprzaka 44/52, 01-224 Warsaw, Poland.ORCID 0000-0001-9919-4447
Agnieszka KamińskaInstitute of Physical Chemistry, Polish Academy of Sciences, Kasprzaka 44/52, 01-224 Warsaw, Poland.
Institute of Physical Chemistry · PLUniversity of Warsaw · PL

Funding

National Science Center PRELUDIUM-20 (2021/41/N/ST4/02164)
6 · The paper itself

Abstract

The accurate identification of microorganisms belonging to vaginal microflora is crucial for establishing which microorganisms are responsible for microbial shifting from beneficial symbiotic to pathogenic bacteria and understanding pathogenesis leading to vaginosis and vaginal infections. In this study, we involved the surface-enhanced Raman spectroscopy (SERS) technique to compile the spectral signatures of the most significant microorganisms being part of the natural vaginal microbiota and some vaginal pathogens. Obtained data will supply our still developing spectral SERS database of microorganisms. The SERS results were assisted by Partial Least Squares Regression (PLSR), which visually discloses some dependencies between spectral images and hence their biochemical compositions of the outer structure. In our work, we focused on the most common and typical of the reproductive system microorganisms (

Indexed as

MicrobiotaVaginosis, BacterialBacteriaBifidobacteriumFemaleGardnerella vaginalisHumansLactobacillusLeast-Squares AnalysisVaginaBifidobacterium spp.Candida spp.Gardnerella vaginalisLactobacillus spp.partial least square regression (PLSR)Prevotella biviaspectral librarysurface-enhanced Raman spectroscopy (SERS)Trichomonas vaginalisvaginal microflora

Identifiers

PMID36293436
PMCPMC9604117
OpenAlexW4306920616

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.