Evidence map›Paper›PMID 36293324›Full record

ArticleInternational journal of molecular sciences2022

Mother-Fetus Immune Cross-Talk Coordinates "Extrinsic"/"Intrinsic" Embryo Gene Expression Noise and Growth Stability.

Tatyana Ivanovna Babochkina, Ludmila Alekseevna Gerlinskaya, Margarita Vladimirovna Anisimova, Galina Vladimirovna Kontsevaya, Natalia Aleksandrovna Feofanova, Aliya Konstantinovna Stanova, Mikhail Pavlovich Moshkin, Yuri Mikhailovich Moshkin

Open access · goldAbstract read
In one paragraph

Article in International journal of molecular sciences, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
0.5field-weighted citation impact, top 38% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 6 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Developmental Biology: Computational and Experimental Approaches.International journal of molecular sciences · 2023
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 3 institutions in 2 countries.

Tatyana Ivanovna BabochkinaFederal Research Center Institute of Cytology and Genetics, Siberian Branch of RAS, 630090 Novosibirsk, Russia.
Ludmila Alekseevna GerlinskayaFederal Research Center Institute of Cytology and Genetics, Siberian Branch of RAS, 630090 Novosibirsk, Russia.
Margarita Vladimirovna AnisimovaFederal Research Center Institute of Cytology and Genetics, Siberian Branch of RAS, 630090 Novosibirsk, Russia.
Galina Vladimirovna KontsevayaFederal Research Center Institute of Cytology and Genetics, Siberian Branch of RAS, 630090 Novosibirsk, Russia.
Natalia Aleksandrovna FeofanovaFederal Research Center Institute of Cytology and Genetics, Siberian Branch of RAS, 630090 Novosibirsk, Russia.
Aliya Konstantinovna StanovaFederal Research Center Institute of Cytology and Genetics, Siberian Branch of RAS, 630090 Novosibirsk, Russia.
Mikhail Pavlovich MoshkinFederal Research Center Institute of Cytology and Genetics, Siberian Branch of RAS, 630090 Novosibirsk, Russia.
Yuri Mikhailovich MoshkinFederal Research Center Institute of Cytology and Genetics, Siberian Branch of RAS, 630090 Novosibirsk, Russia.ORCID 0000-0003-2964-8823
Institute of Cytology and Genetics · RUNational Research Tomsk State University · RUThe Geneva Association · CH

Funding

Russian Science Foundation 20-14-00055
6 · The paper itself

Abstract

Developmental instability (DI) is thought to be inversely related to a capacity of an organism to buffer its development against random genetic and environmental perturbations. DI is represented by a trait's inter- and intra-individual variabilities. The inter-individual variability (inversely referred to as canalization) indicates the capability of organisms to reproduce a trait from individual to individual. The intra-individual variability reflects an organism's capability to stabilize a trait internally under the same conditions, and, for symmetric traits, it is expressed as fluctuating asymmetry (FA). When representing a trait as a random variable conditioned on environmental fluctuations, it is clear that, in statistical terms, the DI partitions into "extrinsic" (canalization) and "intrinsic" (FA) components of a trait's variance/noise. We established a simple statistical framework to dissect both parts of a symmetric trait variance/noise using a PCA (principal component analysis) projection of the left/right measurements on eigenvectors followed by GAMLSS (generalized additive models for location scale and shape) modeling of eigenvalues. The first eigenvalue represents "extrinsic" and the second-"intrinsic" DI components. We applied this framework to investigate the impact of mother-fetus major histocompatibility complex (MHC)-mediated immune cross-talk on gene expression noise and developmental stability. We showed that "intrinsic" gene noise for the entire transcriptional landscape could be estimated from a small subset of randomly selected genes. Using a diagnostic set of genes, we found that allogeneic MHC combinations tended to decrease "extrinsic" and "intrinsic" gene noise in C57BL/6J embryos developing in the surrogate NOD-SCID and BALB/c mothers. The "intrinsic" gene noise was negatively correlated with growth (embryonic mass) and the levels of placental growth factor (PLGF), but not vascular endothelial growth factor (VEGF). However, it was positively associated with phenotypic growth instability and noise in PLGF. In mammals, the mother-fetus MHC interaction plays a significant role in development, contributing to the fitness of the offspring. Our results demonstrate that a positive impact of distant MHC combinations on embryonic growth could be mediated by the reduction of "intrinsic" gene noise followed by the developmental stabilization of growth.

Indexed as

Endothelial Growth FactorsMothersAnimalsFemaleFetusGene ExpressionHumansMammalsMiceMice, Inbred BALB CMice, Inbred C57BLMice, SCIDPhenotypePlacenta Growth FactorVascular Endothelial Growth Factor AEndothelial Growth FactorsPlacenta Growth FactorVascular Endothelial Growth Factor Adevelopmental instabilityfluctuating asymmetryMHCvariance/noise

Identifiers

PMID36293324
PMCPMC9604428
OpenAlexW4306742570

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.