Evidence map›Paper›PMID 36293234›Full record

ArticleInternational journal of molecular sciences2022

DNA Penetration into a Lysozyme Layer at the Surface of Aqueous Solutions.

Nikolay S Chirkov, Shi-Yow Lin, Alexander V Michailov, Reinhard Miller, Boris A Noskov

Open access · goldAbstract read
In one paragraph

Article in International journal of molecular sciences, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
0.3field-weighted citation impact, top 50% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 4 citations in OpenAlex.

  1. Article
  2. Article
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  4. Review
  5. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 3 institutions in 3 countries.

Nikolay S ChirkovInstitute of Chemistry, Saint Petersburg State University, 198504 St. Petersburg, Russia.
Shi-Yow LinDepartment of Chemical Engineering, National Taiwan University of Science and Technology, 43, Keelung Road, Section 4, Taipei 106, Taiwan.
Alexander V MichailovInstitute of Chemistry, Saint Petersburg State University, 198504 St. Petersburg, Russia.
Reinhard MillerPhysics Department, Technical University Darmstadt, Hochschulstraße 8, D-64289 Darmstadt, Germany.ORCID 0000-0001-8943-7521
Boris A NoskovInstitute of Chemistry, Saint Petersburg State University, 198504 St. Petersburg, Russia.
St Petersburg University · RUNational Taiwan University of Science and Technology · TWTechnische Universität Darmstadt · DE

Funding

Russian Science Foundation grant number 21-13-00039.
6 · The paper itself

Abstract

The interactions of DNA with lysozyme in the surface layer were studied by performing infrared reflection-absorption spectroscopy (IRRAS), ellipsometry, surface tensiometry, surface dilational rheology, and atomic force microscopy (AFM). A concentrated DNA solution was injected into an aqueous subphase underneath a spread lysozyme layer. While the optical properties of the surface layer changed fast after DNA injection, the dynamic dilational surface elasticity almost did not change, thereby indicating no continuous network formation of DNA/lysozyme complexes, unlike the case of DNA interactions with a monolayer of a cationic synthetic polyelectrolyte. A relatively fast increase in optical signals after a DNA injection under a lysozyme layer indicates that DNA penetration is controlled by diffusion. At low surface pressures, the AFM images show the formation of long strands in the surface layer. Increased surface compression does not lead to the formation of a network of DNA/lysozyme aggregates as in the case of a mixed layer of DNA and synthetic polyelectrolytes, but to the appearance of some folds and ridges in the layer. The formation of more disordered aggregates is presumably a consequence of weaker interactions of lysozyme with duplex DNA and the stabilization, at the same time, of loops of unpaired nucleotides at high local lysozyme concentrations in the surface layer.

Indexed as

MuramidaseWaterAdsorptionDNANucleotidesPolyelectrolytesSurface PropertiesDNAMuramidaseNucleotidesPolyelectrolytesWateradsorption kineticsdilational surface rheologyDNALangmuir monolayerslysozyme

Identifiers

PMID36293234
PMCPMC9604093
OpenAlexW4306385437

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.