Evidence map›Paper›PMID 36292692›Full record

ArticleGenes2022

Development of SNP Markers from GWAS for Selecting Seed Coat and Aleurone Layers in Brown Rice (

Me-Sun Kim, Seo-Rin Ko, Van Trang Le, Moo-Gun Jee, Yu Jin Jung, Kwon-Kyoo Kang, Yong-Gu Cho

Abstract read
In one paragraph

Article in Genes, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed.

  1. Article
  2. Article
  3. Review
  4. Article
  5. Article
  6. Mapping and validation of quantitative trait loci associated with dorsal aleurone thickness in rice (Oryza sativa).TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2023
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Me-Sun KimDepartment of Crop Science, College of Agriculture and Life & Environment Sciences, Chungbuk National University, Cheongju 28644, Korea.
Seo-Rin KoDepartment of Crop Science, College of Agriculture and Life & Environment Sciences, Chungbuk National University, Cheongju 28644, Korea.
Van Trang LeDepartment of Crop Science, College of Agriculture and Life & Environment Sciences, Chungbuk National University, Cheongju 28644, Korea.
Moo-Gun JeeDepartment of Crop Science, College of Agriculture and Life & Environment Sciences, Chungbuk National University, Cheongju 28644, Korea.
Yu Jin JungDivision of Horticultural Biotechnology, Hankyong National University, Anseong 17579, Korea.ORCID 0000-0002-2134-8335
Kwon-Kyoo KangDivision of Horticultural Biotechnology, Hankyong National University, Anseong 17579, Korea.ORCID 0000-0002-5887-0741
Yong-Gu ChoDepartment of Crop Science, College of Agriculture and Life & Environment Sciences, Chungbuk National University, Cheongju 28644, Korea.ORCID 0000-0003-3213-6669

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Ninety-five percent of the general nutrients in rice are concentrated in the rice bran and germ, and many nutrients such as vitamins, minerals, dietary fiber, and essential fatty acids, as well as antioxidants such as tocopherol, are lost during milling. In this study, we investigated the thickness of seed coat and aleurone layers using a 294 rice core collection, and found candidate genes related to thickness of seed coat and aleurone layers, by performing a genome wide association study (GWAS) analysis using whole genome resequencing data. Two primer pairs that can be used as high-resolution melting (HRM) markers were developed. As a result of genotyping BC

Indexed as

OryzaAntioxidantsDietary FiberGenome-Wide Association StudyHumansPlant BreedingPlant ProteinsSeedsTocopherolsVitaminsaleuroneAntioxidantsDietary FiberPlant ProteinsTocopherolsVitaminsaleurone layerbrown ricecore collectiongenome-wide association study (GWAS)HRM markersseed coat

Identifiers

PMID36292692
PMCPMC9602391

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.