Evidence map›Paper›PMID 36292606›Full record

SynthesisGenes2022

A Comparative Cross-Platform Analysis to Identify Potential Biomarker Genes for Evaluation of Teratozoospermia and Azoospermia.

Suchismita Das, Pokhraj Guha, Monika Nath, Sandipan Das, Surojit Sen, Jagajjit Sahu, Marta Kopanska, Sulagna Dutta, Qazi Mohammad Sajid Jamal, Kavindra Kumar Kesari and 3 more

Open access · goldAbstract readMeta-Analysis
In one paragraph

Synthesis in Genes, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
1.3field-weighted citation impact, top 20% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 8 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors at 8 institutions in 6 countries.

Suchismita DasDepartment of Life Science and Bioinformatics, Assam University, Silchar 788011, India.
Pokhraj GuhaDepartment of Zoology, Garhbeta College, Garhbeta 721127, India.
Monika NathDepartment of Life Science and Bioinformatics, Assam University, Silchar 788011, India.
Sandipan DasDepartment of Life Science and Bioinformatics, Assam University, Silchar 788011, India.
Surojit SenDepartment of Zoology, Mariani College, Mariani 785634, India.ORCID 0000-0002-2926-7281
Jagajjit SahuGyanArras Academy, Gothapatna, Malipada, Bhubaneswar 751003, India.ORCID 0000-0001-7468-5696
Marta KopanskaDepartment of Pathophysiology, Institute of Medical Sciences, College of Medical Sciences, University of Rzeszow, 35959 Rzeszow, Poland.ORCID 0000-0003-3936-0698
Sulagna DuttaSchool of Medical Sciences, Bharath Institute of Higher Education and Research (BIHER), Chennai 600126, India.ORCID 0000-0002-7893-5282
Qazi Mohammad Sajid JamalDepartment of Health Informatics, College of Public Health and Health Informatics, Qassim University, Al Bukayriyah 52741, Saudi Arabia.ORCID 0000-0001-5525-708X
Kavindra Kumar KesariDepartment of Applied Physics, Aalto University, 00076 Espoo, Finland.ORCID 0000-0003-3622-9555
Pallav SenguptaPhysiology Unit, Department of Biomedical Sciences, College of Medicine, Gulf Medical University, Ajman 4184, United Arab Emirates.ORCID 0000-0002-1928-5048
Petr SlamaLaboratory of Animal Immunology and Biotechnology, Department of Animal Morphology, Physiology and Genetics, Faculty of AgriSciences, Mendel University in Brno, Zemedelska 1, 61300 Brno, Czech Republic.ORCID 0000-0003-0570-259X
Shubhadeep RoychoudhuryDepartment of Life Science and Bioinformatics, Assam University, Silchar 788011, India.ORCID 0000-0003-4174-1852
Assam University · INAalto University · FIBharath University · INGulf Medical University · AEHemwati Nandan Bahuguna Garhwal University · INMendel University in Brno · CZQassim University · SAUniversity of Rzeszów · PL

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Male infertility is a global public health concern. Teratozoospermia is a qualitative anomaly of spermatozoa morphology, contributing significantly to male infertility, whereas azoospermia is the complete absence of spermatozoa in the ejaculate. Thus, there is a serious need for unveiling the common origin and/or connection between both of these diseases, if any. This study aims to identify common potential biomarker genes of these two diseases via an in silico approach using a meta-analysis of microarray data. In this study, a differential expression analysis of genes was performed on four publicly available RNA microarray datasets, two each from teratozoospermia (GSE6872 and GSE6967) and azoospermia (GSE145467 and GSE25518). From the analysis, 118 DEGs were found to be common to teratozoospermia and azoospermia, and, interestingly, sperm autoantigenic protein 17 (

Indexed as

AzoospermiaInfertility, MaleTeratozoospermiaBiomarkersHumansMaleRNASemenBiomarkersRNAazoospermiabiomarker genesCCDC90BCCDC91male infertilitySPA17teratozoospermia

Identifiers

PMID36292606
PMCPMC9602071
OpenAlexW4297198512

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.