Evidence map›Paper›PMID 36289454›Full record

ArticleBMC plant biology2022

Proteome-wide analyses reveal diverse functions of protein acetylation and succinylation modifications in fast growing stolons of bermudagrass (Cynodon dactylon L.).

Bing Zhang, Zhuoting Chen, Qixue Sun, Jianxiu Liu

Open access · goldAbstract read
In one paragraph

Article in BMC plant biology, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
0.5field-weighted citation impact, top 38% of its field
1 · What the graph read from it

What it found

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The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

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3 · Its place in the literature

Who cites it

1 citing paper in PubMed, 6 citations in OpenAlex.

  1. Review
4 · The record

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PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 2 institutions in 1 country.

Bing ZhangCollege of Animal Science and Technology, Yangzhou University, Yangzhou, 225009, China. bingzhang@yzu.edu.cn.
Zhuoting ChenCollege of Animal Science and Technology, Yangzhou University, Yangzhou, 225009, China.
Qixue SunCollege of Animal Science and Technology, Yangzhou University, Yangzhou, 225009, China.
Jianxiu LiuInstitute of Botany, Jiangsu Province and Chinese Academy of Sciences, Nanjing, 210014, China.
Yangzhou University · CNChinese Academy of Sciences · CN

Funding

National Natural Science Foundation of China 32072613
6 · The paper itself

Abstract

backgroundBermudagrass (Cynodon dactylon L.) is an important warm-season turfgrass species with well-developed stolons, which lay the foundation for the fast propagation of bermudagrass plants through asexual clonal growth. However, the growth and development of bermudagrass stolons are still poorly understood at the molecular level.

resultsIn this study, we comprehensively analyzed the acetylation and succinylation modifications of proteins in fast-growing stolons of the bermudagrass cultivar Yangjiang. A total of 4657 lysine acetylation sites on 1914 proteins and 226 lysine succinylation sites on 128 proteins were successfully identified using liquid chromatography coupled to tandem mass spectrometry, respectively. Furthermore, 78 proteins and 81 lysine sites were found to be both acetylated and succinylated. Functional enrichment analysis revealed that acetylated proteins regulate diverse reactions of carbohydrate metabolism and protein turnover, whereas succinylated proteins mainly regulate the citrate cycle. These results partly explained the different growth disturbances of bermudagrass stolons under treatment with sodium butyrate and sodium malonate, which interfere with protein acetylation and succinylation, respectively. Moreover, 140 acetylated proteins and 42 succinylated proteins were further characterized having similarly modified orthologs in other grass species. Site-specific mutations combined with enzymatic activity assays indicated that the conserved acetylation of catalase and succinylation of malate dehydrogenase both inhibited their activities, further implying important regulatory roles of the two modifications.

conclusionIn summary, our study implied that lysine acetylation and succinylation of proteins possibly play important regulatory roles in the fast growth of bermudagrass stolons. The results not only provide new insights into clonal growth of bermudagrass but also offer a rich resource for functional analyses of protein lysine acetylation and succinylation in plants.

Indexed as

CynodonProteomeAcetylationButyric AcidCatalaseCitratesLysineMalate DehydrogenaseMalonatesProtein Processing, Post-TranslationalSodiumButyric AcidCatalaseCitratesLysineMalate DehydrogenaseMalonatesProteomeSodiumAcetylationBermudagrassCynodon dactylonMetabolismStolonSuccinylation

Identifiers

PMID36289454
PMCPMC9608919
OpenAlexW4307658839

What OpenQuestion holds

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LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.