Evidence map›Paper›PMID 36289258›Full record

ArticleScientific reports2022

Intercellular interaction mechanisms promote diversity in intracellular ATP concentration in Escherichia coli populations.

Ryo J Nakatani, Masahiro Itabashi, Takahiro G Yamada, Noriko F Hiroi, Akira Funahashi

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
0.8field-weighted citation impact, top 30% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 10 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 1 institution in 1 country.

Ryo J NakataniGraduate School of Fundamental Science and Technology, Center for Biosciences and Informatics, Keio University, Yokohama, Kanagawa, 223-8522, Japan.
Masahiro ItabashiGraduate School of Fundamental Science and Technology, Center for Biosciences and Informatics, Keio University, Yokohama, Kanagawa, 223-8522, Japan.
Takahiro G YamadaGraduate School of Fundamental Science and Technology, Center for Biosciences and Informatics, Keio University, Yokohama, Kanagawa, 223-8522, Japan.
Noriko F HiroiSchool of Medicine, Keio University, Shinjuku-ku, Tokyo, 160-8582, Japan. hiroi@bio.keio.ac.jp.
Akira FunahashiGraduate School of Fundamental Science and Technology, Center for Biosciences and Informatics, Keio University, Yokohama, Kanagawa, 223-8522, Japan. funa@bio.keio.ac.jp.
Keio University · JP

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

In fluctuating environments, many microorganisms acquire phenotypic heterogeneity as a survival tactic to increase the likelihood of survival of the overall population. One example of this interindividual heterogeneity is the diversity of ATP concentration among members of Escherichia coli populations under glucose deprivation. Despite the importance of such environmentally driven phenotypic heterogeneity, how the differences in intracellular ATP concentration emerge among individual E. coli organisms is unknown. In this study, we focused on the mechanism through which individual E. coli achieve high intracellular ATP concentrations. First, we measured the ATP retained by E. coli over time when cultured at low (0.1 mM) and control (22.2 mM) concentrations of glucose and obtained the chronological change in ATP concentrations. Then, by comparing these chronological change of ATP concentrations and analyzing whether stochastic state transitions, periodic oscillations, cellular age, and intercellular communication-which have been reported as molecular biological mechanisms for generating interindividual heterogeneity-are involved, we showed that the appearance of high ATP-holding individuals observed among E. coli can be explained only by intercellular transmission. By performing metabolomic analysis of post-culture medium, we revealed a significant increase in the ATP, especially at low glucose, and that the number of E. coli that retain significantly higher ATP can be controlled by adding large amounts of ATP to the medium, even in populations cultured under control glucose concentrations. These results reveal for the first time that ATP-mediated intercellular transmission enables some individuals in E. coli populations grown at low glucose to retain large amounts of ATP.

Indexed as

Escherichia coliGlucoseAdenosine TriphosphateCell CommunicationHumansAdenosine TriphosphateGlucose

Identifiers

PMID36289258
PMCPMC9605964
OpenAlexW4307291687

What OpenQuestion holds

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.