Evidence map›Paper›PMID 36288405›Full record

ArticlePLoS biology2022

Shared biophysical mechanisms determine early biofilm architecture development across different bacterial species.

Hannah Jeckel, Francisco Díaz-Pascual, Dominic J Skinner, Boya Song, Eva Jiménez-Siebert, Kerstin Strenger, Eric Jelli, Sanika Vaidya, Jörn Dunkel, Knut Drescher

Abstract read
In one paragraph

Article in PLoS biology, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed.

  1. Article
  2. Article
  3. Review
  4. Review
  5. Preparing a Dual-SpeciesMolecular pharmaceutics · 2025
    Article
  6. Article
  7. Article
  8. Review
  9. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors.

Hannah JeckelBiozentrum, University of Basel, Basel, Switzerland.
Francisco Díaz-PascualMax Planck Institute for Terrestrial Microbiology, Marburg, Germany.
Dominic J SkinnerDepartment of Mathematics, Massachusetts Institute of Technology, Cambridge, Massachusetts, United States of America.
Boya SongDepartment of Mathematics, Massachusetts Institute of Technology, Cambridge, Massachusetts, United States of America.
Eva Jiménez-SiebertBiozentrum, University of Basel, Basel, Switzerland.
Kerstin StrengerBiozentrum, University of Basel, Basel, Switzerland.
Eric JelliMax Planck Institute for Neurobiology of Behavior, Bonn, Germany.
Sanika VaidyaMax Planck Institute for Terrestrial Microbiology, Marburg, Germany.
Jörn DunkelDepartment of Mathematics, Massachusetts Institute of Technology, Cambridge, Massachusetts, United States of America.
Knut DrescherBiozentrum, University of Basel, Basel, Switzerland.ORCID 0000-0002-7340-2444

Funding

European Research Council 716734
6 · The paper itself

Abstract

Bacterial biofilms are among the most abundant multicellular structures on Earth and play essential roles in a wide range of ecological, medical, and industrial processes. However, general principles that govern the emergence of biofilm architecture across different species remain unknown. Here, we combine experiments, simulations, and statistical analysis to identify shared biophysical mechanisms that determine early biofilm architecture development at the single-cell level, for the species Vibrio cholerae, Escherichia coli, Salmonella enterica, and Pseudomonas aeruginosa grown as microcolonies in flow chambers. Our data-driven analysis reveals that despite the many molecular differences between these species, the biofilm architecture differences can be described by only 2 control parameters: cellular aspect ratio and cell density. Further experiments using single-species mutants for which the cell aspect ratio and the cell density are systematically varied, and mechanistic simulations show that tuning these 2 control parameters reproduces biofilm architectures of different species. Altogether, our results show that biofilm microcolony architecture is determined by mechanical cell-cell interactions, which are conserved across different species.

Indexed as

BiofilmsVibrio choleraeEscherichia coliPseudomonas aeruginosa

Identifiers

PMID36288405
PMCPMC9605341

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.