Evidence map›Paper›PMID 36288371›Full record

ArticlePloS one2022

PiSpy: An affordable, accessible, and flexible imaging platform for the automated observation of organismal biology and behavior.

Benjamin I Morris, Marcy J Kittredge, Bea Casey, Owen Meng, André Maia Chagas, Matt Lamparter, Thomas Thul, Gregory M Pask

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
1.8field-weighted citation impact, top 13% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 7 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 3 institutions in 2 countries.

Benjamin I MorrisProgram in Molecular Biology and Biochemistry, Middlebury College, Middlebury, Vermont, United States of America.
Marcy J KittredgeNeuroscience Program, Bucknell University, Lewisburg, Pennsylvania, United States of America.
Bea CaseyDepartment of Electrical and Computer Engineering, Bucknell University, Lewisburg, Pennsylvania, United States of America.
Owen MengDepartment of Electrical and Computer Engineering, Bucknell University, Lewisburg, Pennsylvania, United States of America.
André Maia ChagasSussex Neuroscience, School of Life Sciences, University of Sussex, Brighton, United Kingdom.
Matt LamparterDepartment of Electrical and Computer Engineering, Bucknell University, Lewisburg, Pennsylvania, United States of America.
Thomas ThulDepartment of Biomedical Engineering, Bucknell University, Lewisburg, Pennsylvania, United States of America.
Gregory M PaskProgram in Molecular Biology and Biochemistry, Middlebury College, Middlebury, Vermont, United States of America.ORCID 0000-0002-7904-1491
Bucknell University · USMiddlebury College · USUniversity of Sussex · GB

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

A great deal of understanding can be gleaned from direct observation of organismal growth, development, and behavior. However, direct observation can be time consuming and influence the organism through unintentional stimuli. Additionally, video capturing equipment can often be prohibitively expensive, difficult to modify to one's specific needs, and may come with unnecessary features. Here, we describe PiSpy, a low-cost, automated video acquisition platform that uses a Raspberry Pi computer and camera to record video or images at specified time intervals or when externally triggered. All settings and controls, such as programmable light cycling, are accessible to users with no programming experience through an easy-to-use graphical user interface. Importantly, the entire PiSpy system can be assembled for less than $100 using laser-cut and 3D-printed components. We demonstrate the broad applications and flexibility of PiSpy across a range of model and non-model organisms. Designs, instructions, and code can be accessed through an online repository, where a global community of PiSpy users can also contribute their own unique customizations and help grow the community of open-source research solutions.

Indexed as

BiologyDiagnostic Imaging

Identifiers

PMID36288371
PMCPMC9604989
OpenAlexW4307313453

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.