Evidence map›Paper›PMID 36288183›Full record

ArticleVeterinary sciences2022

Prediction of the Effect of Methylation in the Promoter Region of ZP2 Gene on Egg Production in Jinghai Yellow Chickens.

Jin Zhang, Xiang-Qian Zhang, Xuan-Ze Ling, Xiu-Hua Zhao, Kai-Zhi Zhou, Jin-Yu Wang, Gen-Xi Zhang

Open access · goldAbstract read
In one paragraph

Article in Veterinary sciences, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
0.8field-weighted citation impact, top 21% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed, 4 citations in OpenAlex.

  1. Article
  2. DNA methylation in poultry: a review.Journal of animal science and biotechnology · 2023
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 2 institutions in 1 country.

Jin ZhangCollege of Animal Science and Technology, Yangzhou University, Yangzhou 225000, China.
Xiang-Qian ZhangCollege of Animal Science and Technology, Yangzhou University, Yangzhou 225000, China.
Xuan-Ze LingCollege of Animal Science and Technology, Yangzhou University, Yangzhou 225000, China.
Xiu-Hua ZhaoInstitute of Animal Husbandry, Heilongjiang Academy of Agricultural Sciences, Harbin 150001, China.
Kai-Zhi ZhouCollege of Animal Science and Technology, Yangzhou University, Yangzhou 225000, China.ORCID 0000-0002-8808-6800
Jin-Yu WangCollege of Animal Science and Technology, Yangzhou University, Yangzhou 225000, China.
Gen-Xi ZhangCollege of Animal Science and Technology, Yangzhou University, Yangzhou 225000, China.
Yangzhou University · CNAnimal Science Research Institute · CN

Funding

China's Agricultural Research System CARS-41Jiangsu Graduate Scientific Research Innovation Program KYCX22_3534New Agricultural Breeds Creation Project in Jiangsu Province PZCZ201730Postgraduate Research & Practice Innovation Program of Jiangsu Province KYCX22_3534Priority Academic Program Development of Jiangsu Higher Education Institutions PAPD
6 · The paper itself

Abstract

Egg production in chickens is a quantitative trait. The aim of this study was to investigate the effect of promoter methylation of the Zona pellucida 2 (ZP2) gene on egg production. Real-time fluorescence quantification showed that the expression of the ZP2 gene in the ovaries of 300-day-old Jinghai yellow chickens in the high-laying group was significantly higher than that in the low-laying group (p < 0.01). A series of deletion fragments of the ZP2 gene promoter in Jinghai yellow chickens had different promoter activities in DF-1 cells, and the core region of the ZP2 gene promoter was found to be between −1552 and −1348. Four CpG islands in the promoter region of the ZP2 gene were detected by software prediction. The overall degree of methylation of the ZP2-1 amplified fragment was negatively correlated with mRNA expression to some extent (R = −0.197); the overall degree of methylation of the ZP2-2 amplified fragment was also negatively correlated with mRNA expression to some extent (R = −0.264), in which the methylation of methylcytosine (mC)-9, mC-20, and mC-21 sites was significantly negatively correlated with mRNA expression (p < 0.05). In addition, the mC-20 and mC-21 sites are located on the Sp1 transcription factor binding site, and it is speculated that these two sites may be the main sites for regulating transcription. In summary, the methylation sites mC-20 and mC-21 of the ZP2 gene may inhibit the binding of Sp1 and DNA, affect the transcription of the ZP2 gene, and then affect the number of eggs produced by the Jinghai yellow chickens.

Indexed as

CpG islandegg productionJinghai yellow chickensmethylationpromoter

Identifiers

PMID36288183
PMCPMC9609111
OpenAlexW4306404362

What OpenQuestion holds

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.