Evidence map›Paper›PMID 36287984›Full record

ArticleToxins2022

Comparative Venom Proteomics of Iranian,

Parviz Ghezellou, Melissa Dillenberger, Seyed Mahdi Kazemi, Daniel Jestrzemski, Bernhard Hellmann, Bernhard Spengler

Open access · goldAbstract readComparative Study
In one paragraph

Article in Toxins, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
2.4field-weighted citation impact, top 10% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 13 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Review
  5. Article
  6. Article
  7. Venomics of the milos viper (Frontiers in molecular biosciences · 2023
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 1 country.

Parviz GhezellouInstitute of Inorganic and Analytical Chemistry, Justus Liebig University Giessen, 35392 Giessen, Germany.ORCID 0000-0001-5924-9618
Melissa DillenbergerBiochemistry and Molecular Biology, Interdisciplinary Research Center, Justus Liebig University Giessen, 35392 Giessen, Germany.ORCID 0000-0002-4298-6889
Seyed Mahdi KazemiZagros Herpetological Institute, Qom 3715688415, Iran.ORCID 0000-0002-8571-7371
Daniel JestrzemskiInstitute of Occupational Medicine, Social Medicine and Environmental Medicine, Goethe University, 60590 Frankfurt am Main, Germany.ORCID 0000-0003-0652-3016
Bernhard HellmannInstitute of Nutritional Science, Department of Nutrition in Prevention & Therapy, Justus Liebig University Giessen, 35392 Giessen, Germany.
Bernhard SpenglerInstitute of Inorganic and Analytical Chemistry, Justus Liebig University Giessen, 35392 Giessen, Germany.ORCID 0000-0003-0179-5653
Justus-Liebig-Universität Gießen · DEGoethe University Frankfurt · DE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Envenoming by Macrovipera lebetina subspecies causes severe life-threatening difficulties for people living in North Africa and the Middle East. To better understand the pathophysiology of envenoming and improve patient management, knowledge about the venom components of the subspecies is essential. Here, the venom proteomes of Macrovipera lebetina lebetina from Cyprus and Macrovipera lebetina cernovi from Iran were characterized using RP-HPLC separation of the crude venom proteins, SDS-PAGE of fractionated proteins, and LC-MS/MS of peptides obtained from in-gel tryptic digestion of protein bands. Moreover, we also used high-resolution shot-gun proteomics to gain more reliable identification, where the whole venom proteomes were subjected directly to in-solution digestion before LC-HR-MS/MS. The data revealed that both venoms consisted of at least 18 protein families, of which snake venom Zn2+-dependent metalloprotease (SVMP), serine protease, disintegrin, phospholipase A2, C-type lectin-like, and L-amino acid oxidase, together accounted for more than 80% of the venoms’ protein contents. Although the two viper venoms shared mostly similar protein classes, the relative occurrences of these toxins were different in each snake subspecies. For instance, P-I class of SVMP toxins were found to be more abundant than P-III class in the venoms of M. l. cernovi compared to M. l. lebetina, which gives hints at a more potent myonecrotic effect and minor systemic hemorrhage following envenoming by M. l. cernovi than M. l. lebetina. Moreover, single-shot proteomics also revealed many proteins with low abundance (<1%) within the venoms, such as aminopeptidase, hyaluronidase, glutaminyl-peptide cyclotransferase, cystatin, phospholipase B, and vascular endothelial growth factor. Our study extends the in-depth understanding of the venom complexity of M. lebetina subspecies, particularly regarding toxin families associated with envenoming pathogenesis and those hard-detected protein classes expressed in trace amounts.

Indexed as

ProteomicsViperidaeAminopeptidasesAnimalsChromatography, LiquidDisintegrinsHumansHyaluronoglucosaminidaseIranL-Amino Acid OxidaseLectins, C-TypeLysophospholipaseMetalloproteasesProteomeSerine ProteasesTandem Mass SpectrometryAminopeptidasesDisintegrinsHyaluronoglucosaminidaseL-Amino Acid OxidaseLectins, C-TypeLysophospholipaseMetalloproteasesProteomeSerine ProteasesVascular Endothelial Growth Factor AViper VenomsCyprusIranMacrovipera lebetina cernoviMacrovipera lebetina lebetinamass spectrometryproteomicsvenom

Identifiers

PMID36287984
PMCPMC9609362
OpenAlexW4306969045

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.