ArticleCommunications biology2022
Chromosome-scale genome assembly of the brown anole (Anolis sagrei), an emerging model species.
Article in Communications biology, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 33 papers.
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Who cites it
33 citing papers in PubMed, 45 citations in OpenAlex.
- Widespread male-female expression imbalance of X-linked genes across phrynosomatid lizards.Molecular biology and evolution · 2026Article
- Mixed Support for Pleistocene Sea-Level Fluctuations in Promoting the Diversification of Anole Lizards in the Northern Lesser Antilles.Molecular ecology · 2026Article
- Article
- A Surgical Method for Oocyte Injection and CRISPR-Cas9 Mutagenesis inCold Spring Harbor protocols · 2026Article
- Pre-oviposition development of the brown anole (Anolis sagrei).Developmental dynamics : an official publication of the American Association of Anatomists · 2026Article
- The tortured past of young polymorphic sex chromosomes revealed through multiplebioRxiv : the preprint server for biology · 2026Article
- Oogenesis and germinal bed morphology of the brown anole (A. sagrei).Developmental dynamics : an official publication of the American Association of Anatomists · 2026Article
- Demographic expansion and panmixia in a St. Martin endemic, Anolis pogus, coincides with the decline of a competitor.The Journal of heredity · 2026Article
- Poly(A) probe HCR RNA-FISH specifically marks pyriform nurse cells in the brown anole lizard ovary.Developmental biology · 2026Article
- Highly contiguous reference genome assembly of the endangered Orcés' blue whiptail Holcosus orcesi.PloS one · 2026Article
- Morphological and genomic responses to hurricanes arise and persist during a biological invasion.Proceedings of the National Academy of Sciences of the United States of America · 2025Article
- Structural Rearrangements and Selection Promote Phenotypic Evolution in Anolis Lizards.Genome biology and evolution · 2025Article
- Oogenesis and germinal bed morphology of the brown anole (bioRxiv : the preprint server for biology · 2025Article
- Genomes of two Extinct-in-the-Wild reptiles from Christmas Island reveal distinct evolutionary histories and conservation insights.Molecular ecology resources · 2025Article
- The genetic basis of a colorful signal: the polymorphic dewlap of the slender anole (Anolis apletophallus).Heredity · 2025Article
- DNA methylation-based age prediction and sex-specific epigenetic aging in a lizard with female-biased longevity.Science advances · 2025Article
- Sonic hedgehog and fibroblast growth factor 8 regulate the evolution of amniote facial proportions.Communications biology · 2025Article
- Chromosome-level reference genome for the medically important Arabian horned viper (Cerastes gasperettii).GigaScience · 2025Article
- A new cell culture resource for investigations of reptilian gene function.Development (Cambridge, England) · 2024Article
- Observing character displacement from process to pattern in a novel vertebrate community.Nature communications · 2024Article
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Authors and funding
18 authors at 12 institutions in 4 countries.
Funding
Abstract
Rapid technological improvements are democratizing access to high quality, chromosome-scale genome assemblies. No longer the domain of only the most highly studied model organisms, now non-traditional and emerging model species can be genome-enabled using a combination of sequencing technologies and assembly software. Consequently, old ideas built on sparse sampling across the tree of life have recently been amended in the face of genomic data drawn from a growing number of high-quality reference genomes. Arguably the most valuable are those long-studied species for which much is already known about their biology; what many term emerging model species. Here, we report a highly complete chromosome-scale genome assembly for the brown anole, Anolis sagrei - a lizard species widely studied across a variety of disciplines and for which a high-quality reference genome was long overdue. This assembly exceeds the vast majority of existing reptile and snake genomes in contiguity (N50 = 253.6 Mb) and annotation completeness. Through the analysis of this genome and population resequence data, we examine the history of repetitive element accumulation, identify the X chromosome, and propose a hypothesis for the evolutionary history of fusions between autosomes and the X that led to the sex chromosomes of A. sagrei.
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Registered trials
Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.