Evidence map›Paper›PMID 36282360›Full record

ArticleBiomechanics and modeling in mechanobiology2023

The role of the cortex in indentation experiments of animal cells.

Leszek Krzemien, Magdalena Giergiel, Agnieszka Kurek, Jakub Barbasz

Open access · hybridAbstract read
In one paragraph

Article in Biomechanics and modeling in mechanobiology, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
0.4field-weighted citation impact, top 46% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed, 3 citations in OpenAlex.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 2 institutions in 1 country.

Leszek KrzemienJerzy Haber Institute of Catalysis and Surface Chemistry, Polish Academy of Sciences, Niezapominajek 8, 30239, Krakow, Poland.
Magdalena GiergielDepartment of Physics of Nanostructures and Nanotechnology, Institute of Physics, Jagiellonian University, Prof. Stanislawa Lojasiewicza 11, 30348, Krakow, Poland. m.j.giergiel@gmail.com.ORCID http://orcid.org/0000-0002-5502-200X
Agnieszka KurekJerzy Haber Institute of Catalysis and Surface Chemistry, Polish Academy of Sciences, Niezapominajek 8, 30239, Krakow, Poland.
Jakub BarbaszJerzy Haber Institute of Catalysis and Surface Chemistry, Polish Academy of Sciences, Niezapominajek 8, 30239, Krakow, Poland.
Jerzy Haber Institute of Catalysis and Surface Chemistry, Polish Academy of Sciences · PLJagiellonian University · PL

Funding

AGH University of Science and Technology No. POIG.02.03.00-00-028/08AGH University of Science and Technology No. POIG.02.03.00-00-110/13InterDokMed POWR.03.02.00-00-I013/16
6 · The paper itself

Abstract

We present a model useful for interpretation of indentation experiments on animal cells. We use finite element modeling for a thorough representation of the complex structure of an animal cell. In our model, the crucial constituent is the cell cortex-a rigid layer of cytoplasmic proteins present on the inner side of the cell membrane. It plays a vital role in the mechanical interactions between cells. The cell cortex is modeled by a three-dimensional solid to reflect its bending stiffness. This approach allows us to interpret the results of the indentation measurements and extract the mechanical properties of the individual elements of the cell structure. During the simulations, we scan a broad range of parameters such as cortex thickness and Young's modulus, cytoplasm Young's modulus, and indenter radius, which define cell properties and experimental conditions. Finally, we propose a simple closed-form formula that approximates the simulated results with satisfactory accuracy. Our formula is as easy to use as Hertz's function to extract cell properties from the measurement, yet it considers the cell's inner structure, including cell cortex, cytoplasm, and nucleus.

Indexed as

Elastic ModulusAnimalsCell MembraneCytoplasmElasticityAtomic force microscopyCell structureElasticityFinite element method

Identifiers

PMID36282360
PMCPMC9958175
OpenAlexW4307229143

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.