Evidence map›Paper›PMID 36282215›Full record

ArticleThe Journal of cell biology2023

RUFY1 binds Arl8b and mediates endosome-to-TGN CI-M6PR retrieval for cargo sorting to lysosomes.

Shalini Rawat, Dhruba Chatterjee, Rituraj Marwaha, Gitanjali Charak, Gaurav Kumar, Shrestha Shaw, Divya Khatter, Sheetal Sharma, Cecilia de Heus, Nalan Liv and 3 more

Open access · hybridAbstract read
In one paragraph

Article in The Journal of cell biology, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
2.3field-weighted citation impact, top 12% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed, 22 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Review
  6. Article
  7. Article
  8. Article
  9. Review
  10. Article
  11. Article
  12. The Arf family GTPases: Regulation of vesicle biogenesis and beyond.BioEssays : news and reviews in molecular, cellular and developmental biology · 2023
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors at 3 institutions in 2 countries.

Shalini RawatDepartment of Biological Sciences, Indian Institute of Science Education and Research Mohali (IISERM), Punjab, India.ORCID 0000-0001-9119-2869
Dhruba ChatterjeeDepartment of Biological Sciences, Indian Institute of Science Education and Research Mohali (IISERM), Punjab, India.
Rituraj MarwahaDepartment of Biological Sciences, Indian Institute of Science Education and Research Mohali (IISERM), Punjab, India.
Gitanjali CharakDepartment of Biological Sciences, Indian Institute of Science Education and Research Mohali (IISERM), Punjab, India.
Gaurav KumarDivision of Cell Biology and Immunology, CSIR-Institute of Microbial Technology (IMTECH), Chandigarh, India.
Shrestha ShawDepartment of Biological Sciences, Indian Institute of Science Education and Research Mohali (IISERM), Punjab, India.
Divya KhatterDepartment of Biological Sciences, Indian Institute of Science Education and Research Mohali (IISERM), Punjab, India.
Sheetal SharmaDivision of Cell Biology and Immunology, CSIR-Institute of Microbial Technology (IMTECH), Chandigarh, India.
Cecilia de HeusSection Cell Biology, Center for Molecular Medicine, University Medical Center Utrecht, Utrecht, Netherlands.ORCID 0000-0001-8618-8451
Nalan LivSection Cell Biology, Center for Molecular Medicine, University Medical Center Utrecht, Utrecht, Netherlands.ORCID 0000-0003-2654-9117
Judith KlumpermanSection Cell Biology, Center for Molecular Medicine, University Medical Center Utrecht, Utrecht, Netherlands.ORCID 0000-0003-4835-6228
Amit TuliDivision of Cell Biology and Immunology, CSIR-Institute of Microbial Technology (IMTECH), Chandigarh, India.ORCID 0000-0001-5476-4127
Mahak SharmaDepartment of Biological Sciences, Indian Institute of Science Education and Research Mohali (IISERM), Punjab, India.ORCID 0000-0002-4117-4790
Indian Institute of Science Education and Research Mohali · INInstitute of Microbial Technology · INUniversity Medical Center Utrecht · NL

Funding

DBT-Wellcome Trust India Alliance IA/I/14/2/501543DBT-Wellcome Trust India Alliance IA/S/19/1/504270Wellcome Trust
6 · The paper itself

Abstract

Arl8b, an Arf-like GTP-binding protein, regulates cargo trafficking and positioning of lysosomes. However, it is unknown whether Arl8b regulates lysosomal cargo sorting. Here, we report that Arl8b binds to the Rab4 and Rab14 interaction partner, RUN and FYVE domain-containing protein (RUFY) 1, a known regulator of cargo sorting from recycling endosomes. Arl8b determines RUFY1 endosomal localization through regulating its interaction with Rab14. RUFY1 depletion led to a delay in CI-M6PR retrieval from endosomes to the TGN, resulting in impaired delivery of newly synthesized hydrolases to lysosomes. We identified the dynein-dynactin complex as an RUFY1 interaction partner, and similar to a subset of activating dynein adaptors, the coiled-coil region of RUFY1 was required for interaction with dynein and the ability to mediate dynein-dependent organelle clustering. Our findings suggest that Arl8b and RUFY1 play a novel role on recycling endosomes, from where this machinery regulates endosomes to TGN retrieval of CI-M6PR and, consequently, lysosomal cargo sorting.

Indexed as

Adaptor Proteins, Signal TransducingADP-Ribosylation FactorsDyneinsEndosomesLysosomesrab GTP-Binding ProteinsDynactin ComplexHeLa CellsHumansProtein TransportAdaptor Proteins, Signal TransducingADP-Ribosylation FactorsARL8B protein, humanDynactin ComplexDyneinsRab14 protein, humanrab GTP-Binding ProteinsRUFY1 protein, human

Identifiers

PMID36282215
PMCPMC9597352
OpenAlexW4307203413

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.