Evidence map›Paper›PMID 36280718›Full record

ArticleNature methods2022

Resolution doubling in light-sheet microscopy via oblique plane structured illumination.

Bingying Chen, Bo-Jui Chang, Philippe Roudot, Felix Zhou, Etai Sapoznik, Madeleine Marlar-Pavey, James B Hayes, Peter T Brown, Chih-Wei Zeng, Talley Lambert and 6 more

Open access · greenAbstract read
In one paragraph

Article in Nature methods, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 33 papers.

0numbers the graph read from it
0cells of the map it votes in
33citing papers in PubMed
18.2field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

33 citing papers in PubMed, 69 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

16 authors at 6 institutions in 2 countries.

Bingying Chen *Lyda Hill Department of Bioinformatics, University of Texas Southwestern Medical Center, Dallas, TX, USA.
Bo-Jui Chang *Lyda Hill Department of Bioinformatics, University of Texas Southwestern Medical Center, Dallas, TX, USA.ORCID 0000-0002-5513-7106
Philippe RoudotAix-Marseille University, CNRS, Centrale Marseille, I2M, Turing Centre for Living Systems, Marseille, France.
Felix ZhouLyda Hill Department of Bioinformatics, University of Texas Southwestern Medical Center, Dallas, TX, USA.
Etai SapoznikLyda Hill Department of Bioinformatics, University of Texas Southwestern Medical Center, Dallas, TX, USA.ORCID 0000-0001-8472-0299
Madeleine Marlar-PaveyDepartment of Cell Biology, University of Texas Southwestern Medical Center, Dallas, TX, USA.ORCID 0000-0001-5819-0407
James B HayesDepartment of Cell and Developmental Biology, Vanderbilt Medical Center, University of Vanderbilt, Nashville, TN, USA.
Peter T BrownCenter for Biological Physics and Department of Physics, Arizona State University, Tempe, AZ, USA.ORCID 0000-0002-2060-6398
Chih-Wei ZengDepartment of Molecular Biology, University of Texas Southwestern Medical Center, Dallas, TX, USA.
Talley LambertDepartment of Cell Biology, Harvard Medical School, Boston, MA, USA.ORCID 0000-0002-2409-0181
Jonathan R FriedmanDepartment of Cell Biology, University of Texas Southwestern Medical Center, Dallas, TX, USA.ORCID 0000-0001-8155-2429
Chun-Li ZhangDepartment of Molecular Biology, University of Texas Southwestern Medical Center, Dallas, TX, USA.ORCID 0000-0002-2639-4605
Dylan T BurnetteDepartment of Cell and Developmental Biology, Vanderbilt Medical Center, University of Vanderbilt, Nashville, TN, USA.
Douglas P ShepherdCenter for Biological Physics and Department of Physics, Arizona State University, Tempe, AZ, USA.
Kevin M DeanLyda Hill Department of Bioinformatics, University of Texas Southwestern Medical Center, Dallas, TX, USA.ORCID 0000-0003-0839-2320
Reto P FiolkaLyda Hill Department of Bioinformatics, University of Texas Southwestern Medical Center, Dallas, TX, USA. reto.fiolka@utsouthwestern.edu.ORCID 0000-0002-4636-5000
Southwestern Medical Center · USThe University of Texas Southwestern Medical Center · USArizona State University · USVanderbilt University Medical Center · USCentre National de la Recherche Scientifique · FRHarvard University · US

Funding

UT Southwestern Medical Center Simmons Comprehensive Cancer CenterP30CA142543 · NCI · UT SOUTHWESTERN MEDICAL CENTER · PI MELANIE H. COBB · 2010 to 2026
$53.7M
Technical Development Unit 2: Intelligent Hyperspectral Imaging of Subcellular Molecular States at the Whole Organ LevelU54CA268072 · NCI · UT SOUTHWESTERN MEDICAL CENTER · PI Reto Paul Fiolka · 2021 to 2026
$9.1M
UTSW-UNC Center for Cell Signaling AnalysisRM1GM145399 · NIGMS · UT SOUTHWESTERN MEDICAL CENTER · PI Kevin Michael Dean, Klaus M. Hahn · 2022 to 2026
$6.2M
The assembly and function of cellular contractile systemsR35GM125028 · NIGMS · VANDERBILT UNIVERSITY · PI Dylan Tyler Burnette · 2017 to 2026
$4.2M
Transformative microscopes to image across spatiotemporal scalesR35GM133522 · NIGMS · UT SOUTHWESTERN MEDICAL CENTER · PI Reto Paul Fiolka · 2019 to 2026
$3.1M
Spatial Organization of the Mitochondrial Inner MembraneR35GM137894 · NIGMS · UT SOUTHWESTERN MEDICAL CENTER · PI Jonathan R. Friedman · 2020 to 2026
$3.1M
Prune Belly Syndrome: Mechanisms of Filamin A MutationsR01DK127589 · NIDDK · UT SOUTHWESTERN MEDICAL CENTER · PI BAKER, LINDA A., QIN, JUN · 2020 to 2024
$2.5M
In Vivo Reprogramming of NG2 Glia for NeurogenesisR01NS117065 · NINDS · UT SOUTHWESTERN MEDICAL CENTER · PI ZHANG, CHUN-LI · 2020 to 2024
$2.1M
Physical mechanisms of cell rearrangements during germband extension in Drosophila melanogasterR21HD105189 · NICHD · UT SOUTHWESTERN MEDICAL CENTER · PI DOUBROVINSKI, KONSTANTIN, MANDADAPU, KRANTHI KIRAN · 2021 to 2022
$459k
NCI NIH HHS P30 CA142543NCI NIH HHS U54 CA268072NICHD NIH HHS R21 HD105189NIDDK NIH HHS R01 DK127589NIGMS NIH HHS R35 GM125028NIGMS NIH HHS R35 GM133522NIGMS NIH HHS R35 GM137894NIGMS NIH HHS RM1 GM145399NINDS NIH HHS R01 NS117065
6 · The paper itself

Abstract

Structured illumination microscopy (SIM) doubles the spatial resolution of a fluorescence microscope without requiring high laser powers or specialized fluorophores. However, the excitation of out-of-focus fluorescence can accelerate photobleaching and phototoxicity. In contrast, light-sheet fluorescence microscopy (LSFM) largely avoids exciting out-of-focus fluorescence, thereby enabling volumetric imaging with low photobleaching and intrinsic optical sectioning. Combining SIM with LSFM would enable gentle three-dimensional (3D) imaging at doubled resolution. However, multiple orientations of the illumination pattern, which are needed for isotropic resolution doubling in SIM, are challenging to implement in a light-sheet format. Here we show that multidirectional structured illumination can be implemented in oblique plane microscopy, an LSFM technique that uses a single objective for excitation and detection, in a straightforward manner. We demonstrate isotropic lateral resolution below 150 nm, combined with lower phototoxicity compared to traditional SIM systems and volumetric acquisition speed exceeding 1 Hz.

Indexed as

Imaging, Three-DimensionalLightingMicroscopy, FluorescencePhotobleaching

Identifiers

PMID36280718
PMCPMC10182454
OpenAlexW4307189091

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.