Evidence map›Paper›PMID 36278862›Full record

ArticleDevelopment (Cambridge, England)2022

A mutation in THREONINE SYNTHASE 1 uncouples proliferation and transition domains of the root apical meristem: experimental evidence and in silico proposed mechanism.

Monica L García-Gómez, Blanca J Reyes-Hernández, Debee P Sahoo, Selene Napsucialy-Mendivil, Aranza X Quintana-Armas, José A Pedroza-García, Svetlana Shishkova, Héctor H Torres-Martínez, Mario A Pacheco-Escobedo, Joseph G Dubrovsky

Abstract read
In one paragraph

Article in Development (Cambridge, England), 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed.

  1. Review
  2. Review
  3. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors.

Monica L García-GómezDepartamento de Biología Molecular de Plantas, Instituto de Biotecnología, Universidad Nacional Autónoma de México (UNAM), Av. Universidad, 2001, Cuernavaca 62250, Mexico.
Blanca J Reyes-HernándezDepartamento de Biología Molecular de Plantas, Instituto de Biotecnología, Universidad Nacional Autónoma de México (UNAM), Av. Universidad, 2001, Cuernavaca 62250, Mexico.
Debee P SahooDepartamento de Biología Molecular de Plantas, Instituto de Biotecnología, Universidad Nacional Autónoma de México (UNAM), Av. Universidad, 2001, Cuernavaca 62250, Mexico.ORCID 0000-0003-4487-2700
Selene Napsucialy-MendivilDepartamento de Biología Molecular de Plantas, Instituto de Biotecnología, Universidad Nacional Autónoma de México (UNAM), Av. Universidad, 2001, Cuernavaca 62250, Mexico.
Aranza X Quintana-ArmasDepartamento de Biología Molecular de Plantas, Instituto de Biotecnología, Universidad Nacional Autónoma de México (UNAM), Av. Universidad, 2001, Cuernavaca 62250, Mexico.
José A Pedroza-GarcíaDepartamento de Biología Molecular de Plantas, Instituto de Biotecnología, Universidad Nacional Autónoma de México (UNAM), Av. Universidad, 2001, Cuernavaca 62250, Mexico.
Svetlana ShishkovaDepartamento de Biología Molecular de Plantas, Instituto de Biotecnología, Universidad Nacional Autónoma de México (UNAM), Av. Universidad, 2001, Cuernavaca 62250, Mexico.ORCID 0000-0003-0530-6239
Héctor H Torres-MartínezDepartamento de Biología Molecular de Plantas, Instituto de Biotecnología, Universidad Nacional Autónoma de México (UNAM), Av. Universidad, 2001, Cuernavaca 62250, Mexico.
Mario A Pacheco-EscobedoFacultad de Ciencias de la Salud, Universidad Tecnológica de México - UNITEC MÉXICO - Campus Atizapán, Av. Calacoaya 7, Atizapán de Zaragoza, Estado de México, 52970, Mexico.ORCID 0000-0002-6681-7000
Joseph G DubrovskyDepartamento de Biología Molecular de Plantas, Instituto de Biotecnología, Universidad Nacional Autónoma de México (UNAM), Av. Universidad, 2001, Cuernavaca 62250, Mexico.ORCID 0000-0002-2072-4650

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

A continuum from stem to transit-amplifying to a differentiated cell state is a common theme in multicellular organisms. In the plant root apical meristem (RAM), transit-amplifying cells are organized into two domains: cells from the proliferation domain (PD) are displaced to the transition domain (TD), suggesting that both domains are necessarily coupled. Here, we show that in the Arabidopsis thaliana mto2-2 mutant, in which threonine (Thr) synthesis is affected, the RAM lacks the PD. Through a combination of cell length profile analysis, mathematical modeling and molecular markers, we establish that the PD and TD can be uncoupled. Remarkably, although the RAM of mto2-2 is represented solely by the TD, the known factors of RAM maintenance and auxin signaling are expressed in the mutant. Mathematical modeling predicts that the stem cell niche depends on Thr metabolism and that, when disturbed, the normal continuum of cell states becomes aborted.

Indexed as

ArabidopsisArabidopsis ProteinsCarbon-Oxygen LyasesCell ProliferationGene Expression Regulation, PlantMeristemMutationPlant RootsThreonineArabidopsis ProteinsCarbon-Oxygen LyasesThreoninethreonine synthaseArabidopsis thalianaMeristem exhaustionMeristem maintenanceRoot apical meristemStem cellsThreonine metabolismTransit-amplifying cells

Identifiers

PMID36278862
PMCPMC9796171

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.