Evidence map›Paper›PMID 36278095›Full record

ArticleACS omega2022

Effects of Local Sequence, Reaction Conditions, and Various Additives on the Formation and Stability of Interstrand Cross-Links Derived from the Reaction of an Abasic Site with an Adenine Residue in Duplex DNA.

Saosan Binth Md Amin, Tanhaul Islam, Nathan E Price, Amanda Wallace, Xu Guo, Anuoluwapo Gomina, Marjan Heidari, Kevin M Johnson, Calvin D Lewis, Zhiyu Yang and 1 more

Open access · goldAbstract read
In one paragraph

Article in ACS omega, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
1.0field-weighted citation impact, top 27% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 12 citations in OpenAlex.

  1. Article
  2. Article
  3. Review
  4. An interstrand DNA crosslink glycosylase aidsProceedings of the National Academy of Sciences of the United States of America · 2024
    Article
  5. Article
  6. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 1 institution in 1 country.

Saosan Binth Md AminDepartment of Chemistry, University of Missouri, Columbia, Missouri 65211, United States.
Tanhaul IslamDepartment of Chemistry, University of Missouri, Columbia, Missouri 65211, United States.
Nathan E PriceDepartment of Chemistry, University of Missouri, Columbia, Missouri 65211, United States.
Amanda WallaceDepartment of Chemistry, University of Missouri, Columbia, Missouri 65211, United States.
Xu GuoDepartment of Chemistry, University of Missouri, Columbia, Missouri 65211, United States.
Anuoluwapo GominaDepartment of Chemistry, University of Missouri, Columbia, Missouri 65211, United States.ORCID https://orcid.org/0000-0002-2874-3119
Marjan HeidariDepartment of Chemistry, University of Missouri, Columbia, Missouri 65211, United States.
Kevin M JohnsonDepartment of Chemistry, University of Missouri, Columbia, Missouri 65211, United States.
Calvin D LewisDepartment of Chemistry, University of Missouri, Columbia, Missouri 65211, United States.
Zhiyu YangDepartment of Chemistry, University of Missouri, Columbia, Missouri 65211, United States.
Kent S GatesDepartment of Biochemistry, University of Missouri, Columbia, Missouri 65211, United States.ORCID https://orcid.org/0000-0002-4218-7411
University of Missouri · US

Funding

Cross-links At Abasic Sites in Duplex DNAR01ES021007 · NIEHS · UNIVERSITY OF MISSOURI-COLUMBIA · PI GATES, KENT S, WANG, YINSHENG · 2012 to 2023
$3.7M
NIEHS NIH HHS R01 ES021007
6 · The paper itself

Abstract

The experiments described here examined the effects of reaction conditions, various additives, and local sequence on the formation and stability interstrand cross-links (ICLs) derived from the reaction of an apurinic/apyrimidinic (AP) site with the exocyclic amino group of an adenine residue on the opposing strand in duplex DNA. Cross-link formation was observed in a range of different buffers, with faster formation rates observed at pH 5. Inclusion of the base excision repair enzyme alkyladenine DNA glycosylase (hAAG) which binds tightly to AP-containing duplexes decreased, but did not completely prevent, formation of the dA-AP ICL. Formation of the dA-AP ICL was not altered by the presence of the biological metal ion Mg

Identifiers

PMID36278095
PMCPMC9583646
OpenAlexW4301186656

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.