Evidence map›Paper›PMID 36277863›Full record

ArticleCEUR workshop proceedings2016

Identifying Missing Hierarchical Relations in SNOMED CT from Logical Definitions Based on the Lexical Features of Concept Names.

Olivier Bodenreider

Abstract read
In one paragraph

Article in CEUR workshop proceedings, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 15 papers.

0numbers the graph read from it
0cells of the map it votes in
15citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

15 citing papers in PubMed.

  1. Quantitatively assessing the impact of the quality of SNOMED CT subtype hierarchy on cohort queries.Journal of the American Medical Informatics Association : JAMIA · 2025
    Article
  2. Article
  3. Article
  4. Article
  5. A deep learning approach to identify missing is-a relations in SNOMED CT.Journal of the American Medical Informatics Association : JAMIA · 2023
    Article
  6. A substring replacement approach for identifying missing IS-A relations in SNOMED CT.Proceedings. IEEE International Conference on Bioinformatics and Biomedicine · 2022
    Article
  7. Article
  8. Automated Identification of Missing IS-A Relations in the Human Phenotype Ontology.AMIA ... Annual Symposium proceedings. AMIA Symposium · 2022
    Article
  9. Article
  10. Article
  11. Article
  12. Article
  13. Article
  14. Review
  15. Quality Assurance of NCI Thesaurus by Mining Structural-Lexical Patterns.AMIA ... Annual Symposium proceedings. AMIA Symposium · 2017
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

1 author.

Olivier BodenreiderU.S. National Library of Medicine, National Institutes of Health, Bethesda, Maryland, USA.

Funding

Medical Ontology ResearchZIALM010017 · NLM · NATIONAL LIBRARY OF MEDICINE · PI BODENREIDER, OLIVIER · 2021 to 2023
$6.0M
Intramural NIH HHS ZIA LM010017
6 · The paper itself

Abstract

Objectives: To identify missing hierarchical relations in SNOMED CT from logical definitions based on the lexical features of concept names. Methods: We first create logical definitions from the lexical features of concept names, which we represent in OWL EL. We infer hierarchical ( Results: Applied to 15,833 disorder and procedure concepts, our approach identified 559 potentially missing hierarchical relations, of which 78% were deemed valid. Conclusions: This lexical approach to quality assurance is easy to implement, efficient and scalable.

Indexed as

description logicslexical featuresquality assuranceSNOMED CT

Identifiers

PMID36277863
PMCPMC9584353

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.