Evidence map›Paper›PMID 36276589›Full record

ArticleApplied physics letters2022

Extended depth-of-field light-sheet microscopy improves imaging of large volumes at high numerical aperture.

Kevin Keomanee-Dizon, Matt Jones, Peter Luu, Scott E Fraser, Thai V Truong

Abstract read
In one paragraph

Article in Applied physics letters, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed.

  1. Article
  2. Article
  3. Acoustic Tweezers for Microscopy of Living Organisms.IEEE transactions on bio-medical engineering · 2025
    Article
  4. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Kevin Keomanee-DizonTranslational Imaging Center, University of Southern California, Los Angeles, California 90089, USA.
Matt JonesTranslational Imaging Center, University of Southern California, Los Angeles, California 90089, USA.
Peter Luu

Funding

Dynamic mapping of the complete synaptome using recombinant probesR01MH107238 · NIMH · UNIVERSITY OF SOUTHERN CALIFORNIA · PI ARNOLD, DONALD B, FRASER, SCOTT E · 2014 to 2018
$9.7M
Whole-Brain Functional Imaging and Analysis of Zebrafish SleepUF1NS126562 · NINDS · CALIFORNIA INSTITUTE OF TECHNOLOGY · PI GOODHILL, GEOFFREY J, PROBER, DAVID AARON · 2022 to 2023
$3.4M
Probing Neural Circuits of Zebrafish Sleep with Electrophysiology and Calcium ImagingR34NS126800 · NINDS · CALIFORNIA INSTITUTE OF TECHNOLOGY · PI PROBER, DAVID AARON, TRUONG, THAI V. · 2022 to 2022
$763k
NIMH NIH HHS R01 MH107238NINDS NIH HHS R34 NS126800NINDS NIH HHS UF1 NS126562
6 · The paper itself

Abstract

Light-sheet microscopes must compromise among field of view, optical sectioning, resolution, and detection efficiency. High-numerical-aperture (NA) detection objective lenses provide higher resolution, but their narrow depth of field inefficiently captures the fluorescence signal generated throughout the thickness of the illumination light sheet when imaging large volumes. Here, we present ExD-SPIM (extended depth-of-field selective-plane illumination microscopy), an improved light-sheet microscopy strategy that solves this limitation by extending the depth of field (DOF) of high-NA detection objectives to match the thickness of the illumination light sheet. This extension of the DOF uses a phase mask to axially stretch the point-spread function of the objective lens while largely preserving lateral resolution. This matching of the detection DOF to the illumination-sheet thickness increases the total fluorescence collection, reduces the background, and improves the overall signal-to-noise ratio (SNR), as shown by numerical simulations, imaging of bead phantoms, and imaging living animals. In comparison to conventional light sheet imaging with low-NA detection that yields equivalent DOF, the results show that ExD-SPIM increases the SNR by more than threefold and dramatically reduces the rate of photobleaching. Compared to conventional high-NA detection, ExD-SPIM improves the signal sensitivity and volumetric coverage of whole-brain activity imaging, increasing the number of detected neurons by over a third.

Identifiers

PMID36276589
PMCPMC9586705

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.