Evidence map›Paper›PMID 36275684›Full record

ArticleFrontiers in immunology2022

H7N9 bearing a mutation in the nucleoprotein leads to increased pathology in chickens.

Daniel S Layton, Jeffrey Butler, Cameron Stewart, Vicky Stevens, Jean Payne, Christina Rootes, Celine Deffrasnes, Som Walker, Songhua Shan, Tamara J Gough and 8 more

Open access · goldAbstract read
In one paragraph

Article in Frontiers in immunology, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
0.6field-weighted citation impact, top 31% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 4 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

18 authors at 4 institutions in 1 country.

Daniel S LaytonCommonwealth Scientific and Industrial Research Organisation (CSIRO) Health and Biosecurity, Australian Centre for Disease Preparedness, Geelong, VIC, Australia.
Jeffrey ButlerCommonwealth Scientific and Industrial Research Organisation (CSIRO) Australian Animal Health Laboratory, Australian Centre for Disease Preparedness, Geelong, VIC, Australia.
Cameron StewartCommonwealth Scientific and Industrial Research Organisation (CSIRO) Health and Biosecurity, Australian Centre for Disease Preparedness, Geelong, VIC, Australia.
Vicky StevensCommonwealth Scientific and Industrial Research Organisation (CSIRO) Australian Animal Health Laboratory, Australian Centre for Disease Preparedness, Geelong, VIC, Australia.
Jean PayneCommonwealth Scientific and Industrial Research Organisation (CSIRO) Australian Animal Health Laboratory, Australian Centre for Disease Preparedness, Geelong, VIC, Australia.
Christina RootesCommonwealth Scientific and Industrial Research Organisation (CSIRO) Health and Biosecurity, Australian Centre for Disease Preparedness, Geelong, VIC, Australia.
Celine DeffrasnesCommonwealth Scientific and Industrial Research Organisation (CSIRO) Health and Biosecurity, Australian Centre for Disease Preparedness, Geelong, VIC, Australia.
Som WalkerCommonwealth Scientific and Industrial Research Organisation (CSIRO) Australian Animal Health Laboratory, Australian Centre for Disease Preparedness, Geelong, VIC, Australia.
Songhua ShanCommonwealth Scientific and Industrial Research Organisation (CSIRO) Australian Animal Health Laboratory, Australian Centre for Disease Preparedness, Geelong, VIC, Australia.
Tamara J GoughCommonwealth Scientific and Industrial Research Organisation (CSIRO) Health and Biosecurity, Australian Centre for Disease Preparedness, Geelong, VIC, Australia.
Christopher CowledCommonwealth Scientific and Industrial Research Organisation (CSIRO) Health and Biosecurity, Australian Centre for Disease Preparedness, Geelong, VIC, Australia.
Kerri BruceCommonwealth Scientific and Industrial Research Organisation (CSIRO) Health and Biosecurity, Australian Centre for Disease Preparedness, Geelong, VIC, Australia.
Jianning WangCommonwealth Scientific and Industrial Research Organisation (CSIRO) Australian Animal Health Laboratory, Australian Centre for Disease Preparedness, Geelong, VIC, Australia.
Katherine KedzierskaDepartment of Microbiology & Immunology, University of Melbourne, at the Peter Doherty Institute for Infection & Immunity, Parkville, VIC, Australia.
Frank Y K WongCommonwealth Scientific and Industrial Research Organisation (CSIRO) Australian Animal Health Laboratory, Australian Centre for Disease Preparedness, Geelong, VIC, Australia.
Andrew G D BeanCommonwealth Scientific and Industrial Research Organisation (CSIRO) Health and Biosecurity, Australian Centre for Disease Preparedness, Geelong, VIC, Australia.
John BinghamCommonwealth Scientific and Industrial Research Organisation (CSIRO) Australian Animal Health Laboratory, Australian Centre for Disease Preparedness, Geelong, VIC, Australia.
David T WilliamsCommonwealth Scientific and Industrial Research Organisation (CSIRO) Australian Animal Health Laboratory, Australian Centre for Disease Preparedness, Geelong, VIC, Australia.
CSIRO Health and Biosecurity · AUAustralian Centre for Disease Preparedness · AUCommonwealth Scientific and Industrial Research Organisation · AUPeter Doherty Institute · AU

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The zoonotic H7N9 avian influenza (AI) virus first emerged in 2013 as a low pathogenic (LPAI) strain, and has repeatedly caused human infection resulting in severe respiratory illness and a mortality of ~39% (>600 deaths) across five epidemic waves. This virus has circulated in poultry with little to no discernible clinical signs, making detection and control difficult. Contrary to published data, our group has observed a subset of specific pathogen free chickens infected with the H7N9 virus succumb to disease, showing clinical signs consistent with highly pathogenic AI (HPAI). Viral genome sequencing revealed two key mutations had occurred following infection in the haemagglutinin (HA 226 L>Q) and nucleoprotein (NP 373 A>T) proteins. We further investigated the impact of the NP mutation and demonstrated that only chickens bearing a single nucleotide polymorphism (SNP) in their IFITM1 gene were susceptible to the H7N9 virus. Susceptible chickens demonstrated a distinct loss of CD8

Indexed as

Influenza A Virus, H7N9 SubtypeInfluenza in BirdsAnimalsAntiviral AgentsCD8-Positive T-LymphocytesChickensHemagglutininsHumansMutationNucleoproteinsRNAAntiviral AgentsHemagglutininsNucleoproteinsRNAH7N9influenzainterferonMutationT cell

Identifiers

PMID36275684
PMCPMC9583263
OpenAlexW4302304891

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.