Evidence map›Paper›PMID 36275530›Full record

ArticleFrontiers in plant science2022

Two triphosphate tunnel metalloenzymes from apple exhibit adenylyl cyclase activity.

Ye Yuan, Zhiguo Liu, Lili Wang, Lixin Wang, Shuangjiang Chen, Yahong Niu, Xin Zhao, Ping Liu, Mengjun Liu

Open access · goldAbstract read
In one paragraph

Article in Frontiers in plant science, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
1.6field-weighted citation impact, top 15% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 15 citations in OpenAlex.

  1. Article
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  6. Amino acid motifs for the identification of novel protein interactants.Computational and structural biotechnology journal · 2023
    Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 1 institution in 1 country.

Ye YuanCollege of Horticulture, Hebei Agricultural University, Baoding, China.
Zhiguo LiuCollege of Horticulture, Hebei Agricultural University, Baoding, China.
Lili WangCollege of Horticulture, Hebei Agricultural University, Baoding, China.
Lixin WangCollege of Horticulture, Hebei Agricultural University, Baoding, China.
Shuangjiang ChenCollege of Horticulture, Hebei Agricultural University, Baoding, China.
Yahong NiuCollege of Horticulture, Hebei Agricultural University, Baoding, China.
Xin ZhaoCollege of Horticulture, Hebei Agricultural University, Baoding, China.
Ping LiuCollege of Horticulture, Hebei Agricultural University, Baoding, China.
Mengjun LiuCollege of Horticulture, Hebei Agricultural University, Baoding, China.
Hebei Agricultural University · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Adenylyl cyclase (AC) is the key catalytic enzyme for the synthesis of 3',5'-cyclic adenosine monophosphate. Various ACs have been identified in microorganisms and mammals, but studies on plant ACs are still limited. No AC in woody plants has been reported until now. Based on the information on HpAC1, three enzymes were screened out from the woody fruit tree apple, and two of them (MdTTM1 and MdTTM2) were verified and confirmed to display AC activity. Interestingly, in the apple genome, these two genes were annotated as triphosphate tunnel metalloenzymes (TTMs) which were widely found in three superkingdoms of life with multiple substrate specificities and enzymatic activities, especially triphosphate hydrolase. In addition, the predicted structures of these two proteins were parallel, especially of the catalytic tunnel, including conserved domains, motifs, and folded structures. Their tertiary structures exhibited classic TTM properties, like the characteristic EXEXK motif and β-stranded anti-parallel tunnel capable of coordinating divalent cations. Moreover, MdTTM2 and HpAC1 displayed powerful hydrolase activity to triphosphate and restricted AC activity. All of these findings showed that MdTTMs had hydrolysis and AC activity, which could provide new solid evidence for AC distribution in woody plants as well as insights into the relationship between ACs and TTMs.

Indexed as

adenylyl cyclasetertiary structuretriphosphate tunnel metalloenzymesverificationwoody plant

Identifiers

PMID36275530
PMCPMC9582125
OpenAlexW4303195459

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.