Evidence map›Paper›PMID 36274123›Full record

ArticleMicrobial cell factories2022

Medium development and production of carotenoids and exopolysaccharides by the extremophile Rhodothermus marinus DSM16675 in glucose-based defined media.

Israt Jahan Mukti, Roya R R Sardari, Thordis Kristjansdottir, Gudmundur O Hreggvidsson, Eva Nordberg Karlsson

Erratum issuedOpen access · goldAbstract read
In one paragraph

Article in Microbial cell factories, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
0.5field-weighted citation impact, top 38% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 9 citations in OpenAlex.

  1. Review
  2. Article
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  4. Article
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

5 authors at 2 institutions in 2 countries.

Israt Jahan MuktiDivision of Biotechnology, Department of Chemistry, Lund University, Naturvetarvägen 14, 22100, Lund, Sweden.
Roya R R SardariDivision of Biotechnology, Department of Chemistry, Lund University, Naturvetarvägen 14, 22100, Lund, Sweden. roya.sardari@biotek.lu.se.
Thordis KristjansdottirMatis Ohf, Vinlandsleid 12, 113, Reykjavik, Iceland.
Gudmundur O HreggvidssonMatis Ohf, Vinlandsleid 12, 113, Reykjavik, Iceland.
Eva Nordberg KarlssonDivision of Biotechnology, Department of Chemistry, Lund University, Naturvetarvägen 14, 22100, Lund, Sweden.
Lund University · SEUniversity of Iceland · IS

Funding

Horizon 2020 project SECRETed 101000794Novo Nordisk Foundation NNF18OC0034792
6 · The paper itself

Abstract

backgroundThe marine thermophilic bacterium Rhodothermus marinus can degrade many polysaccharides which makes it interesting as a future cell factory. Progress using this bacterium has, however, been hampered by limited knowledge on media and conditions for biomass production, often resulting in low cell yields and low productivity, highlighting the need to develop conditions that allow studies of the microbe on molecular level. This study presents development of defined conditions that support growth, combined with evaluation of production of carotenoids and exopolysaccharides (EPSs) by R. marinus strain DSM 16675.

resultsTwo defined media were initially prepared: one including a low addition of yeast extract (modified Wolfe's medium) and one based on specific components (defined medium base, DMB) to which two amino acids (N and Q), were added. Cultivation trials of R. marinus DSM 16675 in shake flasks, resulted in maximum cell densities (OD

conclusionA minimal defined medium (DRM) was designed that resulted in reproducible growth and an almost doubled formation of both total carotenoids and EPSs. Such defined conditions, are necessary for systematic studies of metabolic pathways, to determine the specific requirements for growth and fully characterize metabolite production.

Indexed as

ExtremophilesTrace ElementsAmino AcidsCarotenoidsCulture MediaGlucosePhosphatesPolysaccharidesReproducibility of ResultsRhodothermusVitaminsAmino AcidsCarotenoidsCulture MediaGlucosePhosphatesPolysaccharidesTrace ElementsVitaminsCarotenoidsDefined mediumExopolysaccharidesMedium developmentRhodothermus marinus DSM 16675Thermophile

Identifiers

PMID36274123
PMCPMC9590192
OpenAlexW4307105959

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.