Evidence map›Paper›PMID 36273330›Full record

ArticleNeuro-oncology2023

Epigenetic upregulation of Schlafen11 renders 
WNT- and SHH-activated medulloblastomas sensitive to cisplatin.

Satoshi Nakata, Junko Murai, Masayasu Okada, Haruhiko Takahashi, Tyler H Findlay, Kristen Malebranche, Akhila Parthasarathy, Satoshi Miyashita, Ramil Gabdulkhaev, Ilan Benkimoun and 30 more

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Article in Neuro-oncology, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
1.9field-weighted citation impact, top 12% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed, 18 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

40 authors at 12 institutions in 3 countries.

Satoshi NakataDepartment of Pathology, Johns Hopkins University School of Medicine, Baltimore, Maryland, USA.
Junko MuraiInstitute for Advanced Biosciences, Keio University, Tsuruoka, Japan.
Masayasu OkadaDepartment of Neurosurgery, Brain Research Institute, Niigata University, Niigata, Japan.
Haruhiko TakahashiDepartment of Neurosurgery, Brain Research Institute, Niigata University, Niigata, Japan.
Tyler H FindlayDepartment of Pathology, Johns Hopkins University School of Medicine, Baltimore, Maryland, USA.
Kristen MalebrancheDepartment of Pathology, Johns Hopkins University School of Medicine, Baltimore, Maryland, USA.
Akhila ParthasarathyDepartment of Pathology, Johns Hopkins University School of Medicine, Baltimore, Maryland, USA.
Satoshi MiyashitaDepartment of System Pathology for Neurological Disorders, Brain Research Institute, Niigata University, Niigata, Japan.
Ramil GabdulkhaevDepartment of Pathology, Brain Research Institute Niigata University, Niigata, Japan.
Ilan BenkimounDepartment of Neuropathology, GHU Paris-Psychiatrie Et Neurosciences, Sainte-Anne Hospital, Paris, France.
Sabine DruillennecInstitut Curie, Centre de Recherche, F-91405, Orsay, France.
Sara ChabiInstitut Curie, Centre de Recherche, F-91405, Orsay, France.
Eleanor HawkinsInstitut Curie, Centre de Recherche, F-91405, Orsay, France.
Hiroaki MiyaharaDepartment of Neuropathology, Institute for Medical Science of Aging, Aichi Medical University, Nagakute, Japan.
Kensuke TateishiDepartment of Neurosurgery, Yokohama City University, Yokohama, Japan.
Shinji YamashitaDivision of Neurosurgery, Department of Clinical Neuroscience, Faculty of Medicine University of Miyazaki, Miyazaki, Japan.
Shiori YamadaDepartment of Neurosurgery, Brain Research Institute, Niigata University, Niigata, Japan.
Taiki SaitoDepartment of Neurosurgery, Brain Research Institute, Niigata University, Niigata, Japan.
Jotaro OnDepartment of Neurosurgery, Brain Research Institute, Niigata University, Niigata, Japan.
Jun WatanabeDepartment of Neurosurgery, Brain Research Institute, Niigata University, Niigata, Japan.
Yoshihiro TsukamotoDepartment of Neurosurgery, Brain Research Institute, Niigata University, Niigata, Japan.
Junichi YoshimuraDepartment of Neurosurgery, Brain Research Institute, Niigata University, Niigata, Japan.
Makoto OishiDepartment of Neurosurgery, Brain Research Institute, Niigata University, Niigata, Japan.
Toshimichi NakanoDepartment of Radiology and Radiation Oncology Niigata University Medical and Dental Hospital, Niigata, Japan.
Masaru ImamuraDepartment of Pediatrics, Niigata University Medical and Dental Hospital, Niigata, Japan.
Chihaya ImaiDepartment of Pediatrics, Niigata University Medical and Dental Hospital, Niigata, Japan.ORCID 0000-0001-7435-3464
Tetsuya YamamotoDepartment of Neurosurgery, Yokohama City University, Yokohama, Japan.
Hideo TakeshimaDepartment of Neurosurgery, Brain Research Institute, Niigata University, Niigata, Japan.
Atsuo T SasakiInstitute for Advanced Biosciences, Keio University, Tsuruoka, Japan.
Fausto J RodriguezDepartment of Neurosurgery, Brain Tumor Center at UC Gardner Neuroscience Institute, Cincinnati, Ohio, USA.
Sumihito NobusawaDepartment of Pathology, Gunma University, Maebashi, Japan.
Pascale VarletDepartment of Neuropathology, GHU Paris-Psychiatrie Et Neurosciences, Sainte-Anne Hospital, Paris, France.
Celio PouponnotInstitut Curie, Centre de Recherche, F-91405, Orsay, France.
Satoru OsukaDepartment of Neurosurgery, School of Medicine and O'Neal Comprehensive Cancer Center, University of Alabama at Birmingham, Alabama, USA.
Yves PommierDevelopmental Therapeutics Branch, Center for Cancer Research, National Cancer Institute, NIH, Bethesda, USA.
Akiyoshi KakitaDepartment of Pathology, Brain Research Institute Niigata University, Niigata, Japan.
Yukihiko FujiiDepartment of Neurosurgery, Brain Research Institute, Niigata University, Niigata, Japan.
Eric H RaabeDepartment of Pediatric Oncology, Johns Hopkins University School of Medicine, Baltimore, Maryland, USA.
Charles G EberhartDepartment of Pathology, Johns Hopkins University School of Medicine, Baltimore, Maryland, USA.ORCID 0000-0002-2910-9427
Manabu NatsumedaDepartment of Pathology, Johns Hopkins University School of Medicine, Baltimore, Maryland, USA.ORCID 0000-0003-3098-8323
Niigata University · JPJohns Hopkins University · USCentre National de la Recherche Scientifique · FRNiigata University Medical and Dental Hospital · JPUniversity of Miyazaki · JPKeio University · JPYokohama City University · JPAichi Medical University · JPAllen Institute for Brain Science · USGunma University · JPNational Cancer Institute · USUniversity of Alabama at Birmingham · US

Funding

UCLA SPORE in Brain CancerP50CA211015 · NCI · UNIVERSITY OF CALIFORNIA LOS ANGELES · PI Robert M Prins · 2017 to 2026
$25.2M
DNA Repair, Cell Cycle Checkpoints and Apoptosis as Targets for Anticancer DrugsZIABC006150 · NCI · DIVISION OF BASIC SCIENCES - NCI · PI POMMIER, YVES · 2009 to 2025
$23.0M
Therapeutic resistance and aggressive malignancy in glioblastomas: the contribution of GTP metabolism through regulation by IMPDH2R01CA255331 · NCI · UNIVERSITY OF CINCINNATI · PI SASAKI, ATSUO · 2021 to 2025
$2.0M
PROTEIN-ASSOCIATED DNA BREAKS AS INDICATOR OF TOPOISOMERASE INHIBITIONZ01BC006150 · NCI · DIVISION OF BASIC SCIENCES - NCI · PI POMMIER, YVES · 1996 to 2008
$1.5M
Targeting Adaptive Radioresistance of GlioblastomaK22CA263305 · NCI · UNIVERSITY OF ALABAMA AT BIRMINGHAM · PI OSUKA, SATORU · 2023 to 2025
$324k
Intramural NIH HHS Z01 BC006150NCI NIH HHS K22 CA263305NCI NIH HHS P50 CA211015NCI NIH HHS R01 CA255331
6 · The paper itself

Abstract

backgroundIntensive chemotherapeutic regimens with craniospinal irradiation have greatly improved survival in medulloblastoma patients. However, survival markedly differs among molecular subgroups and their biomarkers are unknown. Through unbiased screening, we found Schlafen family member 11 (SLFN11), which is known to improve response to DNA damaging agents in various cancers, to be one of the top prognostic markers in medulloblastomas. Hence, we explored the expression and functions of SLFN11 in medulloblastoma.

methodsSLFN11 expression for each subgroup was assessed by immunohistochemistry in 98 medulloblastoma patient samples and by analyzing transcriptomic databases. We genetically or epigenetically modulated SLFN11 expression in medulloblastoma cell lines and determined cytotoxic response to the DNA damaging agents cisplatin and topoisomerase I inhibitor SN-38 in vitro and in vivo.

resultsHigh SLFN11 expressing cases exhibited significantly longer survival than low expressing cases. SLFN11 was highly expressed in the WNT-activated subgroup and in a proportion of the SHH-activated subgroup. While WNT activation was not a direct cause of the high expression of SLFN11, a specific hypomethylation locus on the SLFN11 promoter was significantly correlated with high SLFN11 expression. Overexpression or deletion of SLFN11 made medulloblastoma cells sensitive and resistant to cisplatin and SN-38, respectively. Pharmacological upregulation of SLFN11 by the brain-penetrant histone deacetylase-inhibitor RG2833 markedly increased sensitivity to cisplatin and SN-38 in SLFN11-negative medulloblastoma cells. Intracranial xenograft studies also showed marked sensitivity to cisplatin by SLFN11-overexpression in medulloblastoma cells.

conclusionsHigh SLFN11 expression is one factor which renders favorable outcomes in WNT-activated and a subset of SHH-activated medulloblastoma possibly through enhancing response to cisplatin.

Indexed as

Cerebellar NeoplasmsMedulloblastomaCisplatinEpigenesis, GeneticHedgehog ProteinsHumansIrinotecanNuclear ProteinsUp-RegulationCisplatinHedgehog ProteinsIrinotecanNuclear ProteinsSHH protein, humanSLFN11 protein, humanDNA damaging agentmedulloblastomaSLFN11

Identifiers

PMID36273330
PMCPMC10158119
OpenAlexW4307114519

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.