Evidence map›Paper›PMID 36272994›Full record

ArticleScientific reports2022

Development of an in vivo cleavable donor plasmid for targeted transgene integration by CRISPR-Cas9 and CRISPR-Cas12a.

Riki Ishibashi, Ritsuko Maki, Satsuki Kitano, Hitoshi Miyachi, Fumiko Toyoshima

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
0.6field-weighted citation impact, top 35% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 7 citations in OpenAlex.

  1. Review
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  3. Article
  4. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 1 institution in 1 country.

Riki IshibashiDepartment of Biosystems Science, Institute for Life and Medical Sciences, Kyoto University, Sakyo-Ku, Kyoto, 606-8507, Japan. rishibas@infront.kyoto-u.ac.jp.
Ritsuko MakiDepartment of Biosystems Science, Institute for Life and Medical Sciences, Kyoto University, Sakyo-Ku, Kyoto, 606-8507, Japan.
Satsuki KitanoReproductive Engineering Team, Institute for Life and Medical Sciences, Kyoto University, Sakyo-Ku, Kyoto, 606-8507, Japan.
Hitoshi MiyachiReproductive Engineering Team, Institute for Life and Medical Sciences, Kyoto University, Sakyo-Ku, Kyoto, 606-8507, Japan.
Fumiko ToyoshimaDepartment of Biosystems Science, Institute for Life and Medical Sciences, Kyoto University, Sakyo-Ku, Kyoto, 606-8507, Japan. ftoyoshi@infront.kyoto-u.ac.jp.
Kyoto University · JP

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The CRISPR-Cas system is widely used for genome editing of cultured cells and organisms. The discovery of a new single RNA-guided endonuclease, CRISPR-Cas12a, in addition to the conventional CRISPR-Cas9 has broadened the number of editable target sites on the genome. Here, we developed an in vivo cleavable donor plasmid for precise targeted knock-in of external DNA by both Cas9 and Cas12a. This plasmid, named pCriMGET_9-12a (plasmid of synthetic CRISPR-coded RNA target sequence-equipped donor plasmid-mediated gene targeting via Cas9 and Cas12a), comprises the protospacer-adjacent motif sequences of Cas9 and Cas12a at the side of an off-target free synthetic CRISPR-coded RNA target sequence and a multiple cloning site for donor cassette insertion. pCriMGET_9-12a generates a linearized donor cassette in vivo by both CRISPR-Cas9 and CRISPR-Cas12a, which resulted in increased knock-in efficiency in culture cells. This method also achieved > 25% targeted knock-in of long external DNA (> 4 kb) in mice by both CRISPR-Cas9 and CRISPR-Cas12a. The pCriMGET_9-12a system expands the genomic target space for transgene knock-in and provides a versatile, low-cost, and high-performance CRISPR genome editing tool.

Indexed as

CRISPR-Cas SystemsGene EditingAnimalsDNAEndonucleasesMicePlasmidsRNATransgenesDNAEndonucleasesRNA

Identifiers

PMID36272994
PMCPMC9588054
OpenAlexW4307138640

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.